Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A05
         (1192 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    27   0.82 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.3  

>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 0.82
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 68  SAXRKS*ITAVPQHKHTQSSKNVRRRMFAW 157
           S  R+S + AVP H+H +  +N   R  +W
Sbjct: 202 SRQRRSIVPAVPVHEHVRLRRNAAERHDSW 231


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 498 AVVRPPKGSNPGGLAQPE 551
           A  +PP GS+PG   QP+
Sbjct: 826 AAQQPPPGSHPGAQTQPQ 843


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 534 GLAQPESPPSNPQRXQTRGRKNEP 605
           G   PE PP  P     +G+  EP
Sbjct: 296 GYTGPEGPPGEPGAASEKGQNGEP 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,070,026
Number of Sequences: 2352
Number of extensions: 23248
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134886510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)