Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A05
         (1192 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    33   0.77 
U13178-1|AAA86955.1|  404|Drosophila melanogaster RNA binding pr...    31   4.1  
M15765-1|AAA70425.1|  365|Drosophila melanogaster unknown protei...    31   4.1  
L37083-1|AAC41563.1|  404|Drosophila melanogaster RNA binding pr...    31   4.1  
BT004875-1|AAO45231.1|  399|Drosophila melanogaster LD22761p pro...    31   4.1  
AE014298-2351|AAN09389.1|  399|Drosophila melanogaster CG3606-PB...    31   4.1  
AE014298-2350|AAF48578.2|  399|Drosophila melanogaster CG3606-PA...    31   4.1  
BT001591-1|AAN71346.1|  760|Drosophila melanogaster RE27138p pro...    30   7.2  
AY071846-1|AAL60055.1|  760|Drosophila melanogaster hepatocyte g...    30   7.2  
AY052131-1|AAK93555.1|  510|Drosophila melanogaster SD08104p pro...    30   7.2  
AY051789-1|AAK93213.1|  760|Drosophila melanogaster LD30575p pro...    30   7.2  
AE014134-2339|AAF53293.1|  510|Drosophila melanogaster CG9302-PA...    30   7.2  
AE014134-454|AAF51222.1|  647|Drosophila melanogaster CG2903-PA,...    30   7.2  
AE014134-453|AAN10412.2|  760|Drosophila melanogaster CG2903-PC,...    30   7.2  
AE014134-452|AAF51221.2|  760|Drosophila melanogaster CG2903-PB,...    30   7.2  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   9.5  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   9.5  

>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -1

Query: 343 SPPPLGNSFLAPIPDPSRPCWRRGDPHR*TGERPAAGARSF-ARRKPGPFAPCPKPICST 167
           +P P   S+ AP P PS+       P    G  PAA ++S+ A   P      P P  S+
Sbjct: 385 APAPPSPSYGAPAP-PSKSYGAPAPPSSSYGA-PAAPSKSYGAPAPPSSSYGAPAPPSSS 442

Query: 166 YQAPSKHSSSH 134
           Y APS  SSS+
Sbjct: 443 YGAPSAPSSSY 453


>U13178-1|AAA86955.1|  404|Drosophila melanogaster RNA binding
           protein protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 180 GFGHGAKGPGFRRANERAPAAGLSPVHRWGSPLRQXGRDGSGIGAKKEFPNGGGERRAQK 359
           G+G G  G G+ R N+R    G       G   +  G  G G G    F +  G  R  +
Sbjct: 321 GYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGR 380

Query: 360 QG 365
            G
Sbjct: 381 GG 382


>M15765-1|AAA70425.1|  365|Drosophila melanogaster unknown protein
           protein.
          Length = 365

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 180 GFGHGAKGPGFRRANERAPAAGLSPVHRWGSPLRQXGRDGSGIGAKKEFPNGGGERRAQK 359
           G+G G  G G+ R N+R    G       G   +  G  G G G    F +  G  R  +
Sbjct: 283 GYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGR 342

Query: 360 QG 365
            G
Sbjct: 343 GG 344


>L37083-1|AAC41563.1|  404|Drosophila melanogaster RNA binding
           protein protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 180 GFGHGAKGPGFRRANERAPAAGLSPVHRWGSPLRQXGRDGSGIGAKKEFPNGGGERRAQK 359
           G+G G  G G+ R N+R    G       G   +  G  G G G    F +  G  R  +
Sbjct: 321 GYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGR 380

Query: 360 QG 365
            G
Sbjct: 381 GG 382


>BT004875-1|AAO45231.1|  399|Drosophila melanogaster LD22761p
           protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 180 GFGHGAKGPGFRRANERAPAAGLSPVHRWGSPLRQXGRDGSGIGAKKEFPNGGGERRAQK 359
           G+G G  G G+ R N+R    G       G   +  G  G G G    F +  G  R  +
Sbjct: 316 GYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGR 375

Query: 360 QG 365
            G
Sbjct: 376 GG 377


>AE014298-2351|AAN09389.1|  399|Drosophila melanogaster CG3606-PB,
           isoform B protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 180 GFGHGAKGPGFRRANERAPAAGLSPVHRWGSPLRQXGRDGSGIGAKKEFPNGGGERRAQK 359
           G+G G  G G+ R N+R    G       G   +  G  G G G    F +  G  R  +
Sbjct: 316 GYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGR 375

Query: 360 QG 365
            G
Sbjct: 376 GG 377


>AE014298-2350|AAF48578.2|  399|Drosophila melanogaster CG3606-PA,
           isoform A protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +3

Query: 180 GFGHGAKGPGFRRANERAPAAGLSPVHRWGSPLRQXGRDGSGIGAKKEFPNGGGERRAQK 359
           G+G G  G G+ R N+R    G       G   +  G  G G G    F +  G  R  +
Sbjct: 316 GYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGR 375

Query: 360 QG 365
            G
Sbjct: 376 GG 377


>BT001591-1|AAN71346.1|  760|Drosophila melanogaster RE27138p
           protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 498 AVVRP-PKGSNPGGLAQPESPPSNPQ 572
           A+ +P P    PGGL Q  +PP NPQ
Sbjct: 591 AIQQPMPPNLQPGGLMQQPAPPGNPQ 616


>AY071846-1|AAL60055.1|  760|Drosophila melanogaster hepatocyte
           growth factor-regulatedtyrosine kinase substrate
           protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 498 AVVRP-PKGSNPGGLAQPESPPSNPQ 572
           A+ +P P    PGGL Q  +PP NPQ
Sbjct: 591 AIQQPMPPNLQPGGLMQQPAPPGNPQ 616


>AY052131-1|AAK93555.1|  510|Drosophila melanogaster SD08104p
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 478 FLTNGSWRLFAPXREATPVAWL--NPKAPPQTPKGXKQGEERMNPKNSWFL 624
           F +NG ++     REA+ +     +PK PP  P   K  EE  + K   FL
Sbjct: 351 FFSNGVFKFEVNVREASKIVEFMRDPKEPPPPPPPEKSWEEEEDSKEVLFL 401


>AY051789-1|AAK93213.1|  760|Drosophila melanogaster LD30575p
           protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 498 AVVRP-PKGSNPGGLAQPESPPSNPQ 572
           A+ +P P    PGGL Q  +PP NPQ
Sbjct: 591 AIQQPMPPNLQPGGLMQQPAPPGNPQ 616


>AE014134-2339|AAF53293.1|  510|Drosophila melanogaster CG9302-PA
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 478 FLTNGSWRLFAPXREATPVAWL--NPKAPPQTPKGXKQGEERMNPKNSWFL 624
           F +NG ++     REA+ +     +PK PP  P   K  EE  + K   FL
Sbjct: 351 FFSNGVFKFEVNVREASKIVEFMRDPKEPPPPPPPEKSWEEEEDSKEVLFL 401


>AE014134-454|AAF51222.1|  647|Drosophila melanogaster CG2903-PA,
           isoform A protein.
          Length = 647

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 498 AVVRP-PKGSNPGGLAQPESPPSNPQ 572
           A+ +P P    PGGL Q  +PP NPQ
Sbjct: 478 AIQQPMPPNLQPGGLMQQPAPPGNPQ 503


>AE014134-453|AAN10412.2|  760|Drosophila melanogaster CG2903-PC,
           isoform C protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 498 AVVRP-PKGSNPGGLAQPESPPSNPQ 572
           A+ +P P    PGGL Q  +PP NPQ
Sbjct: 591 AIQQPMPPNLQPGGLMQQPAPPGNPQ 616


>AE014134-452|AAF51221.2|  760|Drosophila melanogaster CG2903-PB,
           isoform B protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 498 AVVRP-PKGSNPGGLAQPESPPSNPQ 572
           A+ +P P    PGGL Q  +PP NPQ
Sbjct: 591 AIQQPMPPNLQPGGLMQQPAPPGNPQ 616


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 22/60 (36%), Positives = 25/60 (41%)
 Frame = -1

Query: 340 PPPLGNSFLAPIPDPSRPCWRRGDPHR*TGERPAAGARSFARRKPGPFAPCPKPICSTYQ 161
           PPP  N      P P+ P    G P       P AG  ++  R P P AP P P   TYQ
Sbjct: 278 PPPGENEVTPTQPQPTAPVPEYGPP----PPAPPAGP-TYQPRPPAPPAPAPGP---TYQ 329


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 22/60 (36%), Positives = 25/60 (41%)
 Frame = -1

Query: 340 PPPLGNSFLAPIPDPSRPCWRRGDPHR*TGERPAAGARSFARRKPGPFAPCPKPICSTYQ 161
           PPP  N      P P+ P    G P       P AG  ++  R P P AP P P   TYQ
Sbjct: 278 PPPGENEVTPTQPQPTAPVPEYGPP----PPAPPAGP-TYQPRPPAPPAPAPGP---TYQ 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,938,002
Number of Sequences: 53049
Number of extensions: 1111834
Number of successful extensions: 4064
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4050
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6332107740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)