Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A02
(838 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 45 9e-05
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.023
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 36 0.031
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 36 0.054
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 35 0.071
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.16
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 32 0.50
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.66
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 0.88
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 31 1.2
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 1.5
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 1.5
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 30 2.0
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 29 3.5
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 3.5
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 4.7
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 4.7
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 44.8 bits (101), Expect = 9e-05
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G PPPP G PPP GG PP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPP 701
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGA---XPPGXGG 280
P P PPP GG PPPP PP GGA PPG GG
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGG 709
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -2
Query: 381 GGXXPPPPXXXXXXGGXXXXPPP--XGGAXPP 292
G PPPP GG PPP GGA PP
Sbjct: 659 GPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPP 690
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP P G P PPPP
Sbjct: 661 PPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPP 694
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 408 GGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
GG PPPP PP P GG G P PPPP
Sbjct: 669 GGQAGGAPPPPPPPLPG------GAAPPPPPPIGG-GAPPPPPP 705
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPP 382
PP PGG APP GGG PP GG PP
Sbjct: 956 PPPPGGSAPPPGGGAPPLPPP----PGGSAPPPP 985
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGGXXXXXNXXXXXGXXXP 232
P PPP PPPP PPP G A PPG G P
Sbjct: 931 PLPPPPPGGSAPSQPPPPGG----NAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Query: 231 KKKXXGPPXKXXG 193
PP + G
Sbjct: 987 PPPPPPPPMRKLG 999
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP GG PPP GG PPP GG+ PP
Sbjct: 953 PPPPPPP-----GGSAPPP------GGGAPPLPPPPGGSAPP 983
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP P GG P PPPP
Sbjct: 955 PPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPP 988
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Frame = +2
Query: 281 PPXPGGXA----PPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP PGG A PP GG PP GG PP G G PPP
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPP-----GGNAPPPPPPPGGSAPPPGGGAPPLPPP 976
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Frame = +2
Query: 281 PPXPGGXAP-----PXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP PGG AP P G PP GG PP GG PPP
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPP 993
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP GG P PP G PPP GG PP
Sbjct: 920 PPPPPPP-----GGNAPLPP--PPPGGSAPSQPPPPGGNAPP 954
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG---AXPPGXGG 280
P P GG PPPP G PPP GG + PP GG
Sbjct: 904 PGGSESPSASPPGGSVPPPP--PPPGGNAPLPPPPPGGSAPSQPPPPGG 950
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P PPP PPPP PPP G A PP
Sbjct: 920 PPPPPPPGGNAPLPPPPPGG----SAPSQPPPPGGNAPPP 955
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 36.3 bits (80), Expect = 0.031
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPP---XXXXXXGGXXXXPPPXGGAXPPG 289
P PPP G PPPP G PPP GA PPG
Sbjct: 363 PPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPG 406
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
PPP PPP PPP GGA PP
Sbjct: 327 PPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPP 364
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXG 283
PPP GG PPPP GG PPP G P G
Sbjct: 355 PPPV----GGAAPPPP-PPPPVGGPPPPPPPIEGRPPSSLG 390
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
PPP G PPPP PPP GA PP
Sbjct: 315 PPPPPARMGTAPPPPPPSR----SSQRPPPPSRGAPPP 348
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/86 (24%), Positives = 22/86 (25%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPPXXXXF 460
PP P APP PP G PP + PPP
Sbjct: 297 PPPPSRGAPPPPPSRGSAPPPPPARM---GTAPPPPPPSRSSQRPPPPSRGAPPPPSMGM 353
Query: 461 XXXXXXXXXPXXXPXXGXXFAPPPPP 538
P P PPPPP
Sbjct: 354 APPPVGGAAPPPPPPPPVGGPPPPPP 379
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP G APP GG PP + GG PP G PPP
Sbjct: 347 PPPSMGMAPPPVGGAAPPPPPPPPV---GGPPPPPPPIEGRPPSSLGNPPPPPPP 398
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXG 283
P P PP GG PP GG PPP G PP G
Sbjct: 437 PQPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRG 481
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 35.5 bits (78), Expect = 0.054
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP G PPP PPG G
Sbjct: 713 PPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPP----PPPGCAG 752
Score = 35.1 bits (77), Expect = 0.071
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP P G GLP PPPP
Sbjct: 726 PPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPP 759
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPP 536
PPPP PP P G GLP PPP
Sbjct: 698 PPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPP 730
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PPP G P PP G PPP + PG G
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPP-PSPQPGCAG 738
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP G GLP PPPP
Sbjct: 712 PPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPP 745
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 411 PXPPPXXXXXGGXX----PPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP G PPP PPG G
Sbjct: 678 PPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPP-PPPPPGCAG 724
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPP 313
P PP G PPPP G PPP
Sbjct: 727 PPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPP 759
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PPP PPPP G PPP PPG GG
Sbjct: 290 PVPPPPPADGSAPAPPPPPPP------GGAPPPPPPPPPPPPGDGG 329
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPP 313
P P PPP PPPP GG PPP
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 399 PXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P GG PPP PPP GGA PP
Sbjct: 281 PDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPP 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP P G P PPPP
Sbjct: 304 PPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P G PPPP PPP G PP
Sbjct: 278 PEVPDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPP 317
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPP 313
P PPP PPPP G PPP
Sbjct: 305 PPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 402 GGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
GGG V PPPP PP P GG P PPPP
Sbjct: 286 GGGAPVP-----PPPPAD-----GSAPAPPPPPPPGGAPPPPPPPP 321
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 441 GGXXXXXXPXPXPPPXXXXXGGXXPPPP 358
GG P P PPP GG PPPP
Sbjct: 311 GGAPPPPPPPPPPPP---GDGGAPPPPP 335
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGGXXXXXNXXXXXGXXXP 232
P PPP G PPPP GG PP A P + G P
Sbjct: 138 PPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPP 197
Query: 231 KKKXXGPP 208
PP
Sbjct: 198 PPPPPPPP 205
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXP--PPXGGAXPP 292
P P PPP PPPP G P P GG PP
Sbjct: 124 PSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPP 167
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Frame = +2
Query: 281 PPXPG----GXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP PG G PP G G P G GG PP GG G + PPP
Sbjct: 536 PPPPGAGQGGGPPPPGAGQGWGQPPPGA--GQGGGPPPPGAGQGGPPPPGAGQEGPPPP 592
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/80 (33%), Positives = 27/80 (33%), Gaps = 6/80 (7%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXG-----GAXPPGXG-GXXXXXNXXXXXG 244
PPP GG PPPP G PPP G G PPG G G G
Sbjct: 526 PPPGAGQGGG--PPPP-----GAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGG 578
Query: 243 XXXPKKKXXGPPXKXXGTVG 184
P GPP G G
Sbjct: 579 PPPPGAGQEGPPPPGAGQGG 598
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP--GXGGXXXXXNXXXXXGXXXP 232
PPP GG PPPP G GG PP G GG G P
Sbjct: 503 PPPPGAGQGGG-PPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPP 561
Query: 231 -KKKXXGPPXKXXGTVG 184
+ GPP G G
Sbjct: 562 GAGQGGGPPPPGAGQGG 578
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +2
Query: 281 PPXPG-GXAPPX-GGGXXXXPPXXXXLXGGGGXXPPXXXXXGGG---XGXGXFXKXXPPP 445
PP G G PP G G PP G G PP GGG G G PP
Sbjct: 494 PPGAGQGGGPPPPGAGQGGGPPPPG--AGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPG 551
Query: 446 XXXXFXXXXXXXXXPXXXPXXGXXFAPPPPP 538
+ P G PPPP
Sbjct: 552 AGQGWGQPPPGAGQGGGPPPPGAGQGGPPPP 582
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +2
Query: 281 PPXPG---GXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP PG G PP G G PP GGG PP G G G G PPP
Sbjct: 569 PPPPGAGQGGPPPPGAGQEGPPPPGAGQ--GGGPPPP-----GAGQGWG-----LPPP 614
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -1
Query: 535 GGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGGXXFXKXTXPPPPPXXXXXXWGXPPP 362
GGG G PP G GG + GGG PPP WG PPP
Sbjct: 485 GGGQGWGQPPPGAGQGGGPPPPGAGQ---GGG-----------PPPPGAGQGWGQPPP 528
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXG-----GAXPPGXG 283
PPP GG PPPP G PPP G G PPG G
Sbjct: 493 PPPGAGQGGG--PPPP-----GAGQGGGPPPPGAGQGWGQPPPGAG 531
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 293 GGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
G PP G G PP GGG PP G G PPP
Sbjct: 489 GWGQPPPGAGQGGGPP-PPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPP 538
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 7/66 (10%)
Frame = -1
Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGGXXFXKXTXPP-------PPPXXXXXX 380
G G G P PP GG G PP PPP
Sbjct: 496 GAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQG 555
Query: 379 WGXPPP 362
WG PPP
Sbjct: 556 WGQPPP 561
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -1
Query: 535 GGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGGXXFXKXTXPPPPPXXXXXXWGXPPP 362
G G G PP G GG + G + PPPP WG PPP
Sbjct: 562 GAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAG---QGGGPPPP--GAGQGWGLPPP 614
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P PPP G PPPP G PPP G PP
Sbjct: 370 PTNKPPPPPPPTNGPPPPPP----PTNGPPPPPPPTNGPPPP 407
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGGXXXXX 265
GGG P PP PPPP PPP G PP
Sbjct: 341 GGGVNPPPPPTNNPPSPPPPTNNTPPPPP----PTNKPPPPPPPTNGPPPPPPPTNGPPP 396
Query: 264 NXXXXXGXXXPKKKXXGPP 208
G P GPP
Sbjct: 397 PPPPTNGPPPPPPPTNGPP 415
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 369 PPPPXXXXXXGGXXXXPPPXGGAXPP 292
PPPP GG PPP GA PP
Sbjct: 198 PPPPPPPGFPGGAPPPPPPPFGAPPP 223
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PPP G PPPP PPP G PP G
Sbjct: 195 PPPPPPPPPPGFPGGAPPPP------------PPPFGAPPPPALNG 228
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.3 bits (70), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 101 PYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPP 142
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP + PP P P PPPP
Sbjct: 204 PPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPP 237
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PP PPPP PPP PP
Sbjct: 180 PPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP A PP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP PPPP PPP PP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG 304
PPP GG PPPP G PPP GG
Sbjct: 195 PPPPPPGPGGIPPPPPPIR----GGVPPPPPMGG 224
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/87 (27%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPPXXXXF 460
PP PGG P GG P GG PP GG G PP +
Sbjct: 31 PPAPGGYPPAPGG---YPPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAPGIGGPPPSGQY 87
Query: 461 --XXXXXXXXXPXXXPXXGXXFAPPPP 535
P G PPPP
Sbjct: 88 GAPPTSQPYGAPPTSGYPGYQQHPPPP 114
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXP--PGXGGXXXXXNXXXXXGXX 238
P P G PP P GG PP GG P PG G G
Sbjct: 24 PAAPGGYPPAPGGYPPAPGGYPPSGGYGY--PPAGGYPPPQPGYAGGPPPPGIAPGIGGP 81
Query: 237 XPKKKXXGPP 208
P + PP
Sbjct: 82 PPSGQYGAPP 91
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP PPP G P GG
Sbjct: 329 PLPPPPLR--GQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGG 370
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG-----AXPPGXGGXXXXXNXXXXXGX 241
PPP G PPPP PPP G A PPG G
Sbjct: 206 PPPPERSSG---PPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGE 262
Query: 240 XXPKKKXXGPPXK 202
P K PP +
Sbjct: 263 PPPPKNAPPPPKR 275
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P P GG PPPP G PPP P
Sbjct: 357 PPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPPPPAMDKP 398
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP PPP G P GG
Sbjct: 241 PLPPPPLR--GQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGG 282
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG-----AXPPGXGGXXXXXNXXXXXGX 241
PPP G PPPP PPP G A PPG G
Sbjct: 118 PPPPERSSG---PPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGE 174
Query: 240 XXPKKKXXGPPXK 202
P K PP +
Sbjct: 175 PPPPKNAPPPPKR 187
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P P GG PPPP G PPP P
Sbjct: 269 PPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPPPPAMDKP 310
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
PP G PP P G P P G A PPG G
Sbjct: 102 PPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNG 143
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
PP G PP P G P P G PPG G
Sbjct: 876 PPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPGDAG 917
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 441 GGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
GG P P P GG PPP G PPP G A PP
Sbjct: 167 GGYPGYNQPPPGHYPAPGQPGGYYPPP--------GGYQQPPPGGYAPPP 208
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PP G PPP G PP GG P GG
Sbjct: 158 PPGTQPPGQGGYPGYNQPPPGHYPAPGQPGGYYPPPGGYQQPPPGG 203
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXP 295
P P PPP PPPP PPP P
Sbjct: 216 PPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPP 256
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPP 313
P PPP GG PPPP G PPP
Sbjct: 211 PMGGPPPMGGPPGGYPPPPP---PPGAGDPAYPPP 242
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 281 PPXP--GGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXG 400
PP P GG PP GG PP GGG PP G
Sbjct: 644 PPNPFFGGIPPPPPGGGMFPPPPPPP-PGGGVPGPPKPPPPG 684
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = +2
Query: 281 PPXPGGXA----PPXGGGXXXXPPXXXXLXGGGG 370
PP PG A PP GG PP GGGG
Sbjct: 181 PPPPGAPAAPPAPPFGGPPSAPPPPPAPPVGGGG 214
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPP 358
P P PPP G PPPP
Sbjct: 755 PPPPPPPAVPGEGARPPPPP 774
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,404
Number of Sequences: 59808
Number of extensions: 242932
Number of successful extensions: 1898
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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