Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A02
         (838 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
 Frame = +2

Query: 281 PPXPGGXAP-PXGGGXXXXP----PXXXXLXGGGGXXPP 382
           PP P G  P P  GG    P    P    L G GG  PP
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
 Frame = +2

Query: 293 GGXAPPXGGGXXXX-PPXXXXLXGGGGXXPPXXXXXGGGXG 412
           GG A   GGG      P      GGGG   P     GG  G
Sbjct: 817 GGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGG 857


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = -1

Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGG 437
           GGG  G P P  G   GG             GGG
Sbjct: 215 GGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGG 248



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
 Frame = +2

Query: 293 GGXAPPXGGGXXXXPPXXXXLXGGG---GXXPPXXXXXGGGXGXG 418
           GG AP  GGG    P       GGG             GGG G G
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 360 GGGGSPHXXXXXXGGGGG 413
           GGGGS        GGGGG
Sbjct: 214 GGGGSSGGPGPGGGGGGG 231


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 360  GGGGSPHXXXXXXGGGGG 413
            G GGSP       GGGGG
Sbjct: 1485 GYGGSPTKGAGGGGGGGG 1502


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,486
Number of Sequences: 2352
Number of extensions: 8259
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)