Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_A02
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 43 2e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.004
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.004
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.004
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.015
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.015
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 35 0.082
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 34 0.14
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 34 0.14
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 33 0.19
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.58
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.58
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 0.58
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 1.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.8
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.3
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 30 2.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 5.4
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 7.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 7.2
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 7.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 7.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 7.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 7.2
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 28 7.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 9.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 9.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.5
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G PPPP GG PPP GG P
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP P G P PPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXXPXGGXGLPXPPPP 539
PPPP PP P G P PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = -2
Query: 417 PXPXPPPXXXXX--GGXXPPPPXXXXXX--GGXXXXPPPXGGAXPP 292
P P PPP GG PPPP GG PPP GG PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP GG P GG PPPP PP P GG
Sbjct: 715 PPPGLPPITGGPPPPPPP-------GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 513 XGLPXPPPP 539
P PPPP
Sbjct: 768 CPPPPPPPP 776
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXX-GGXXXXPPPXGGAXPPGXGG 280
P PP GG PPPP G PPP GG PP GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISGG 757
Score = 32.3 bits (70), Expect = 0.44
Identities = 28/91 (30%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +2
Query: 281 PPXPGGXAPPXG-----GGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP GG PP G GG PP GG PP GG PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPP 764
Query: 446 XXXXFXXXXXXXXXPXXXPXXGXXFAPPPPP 538
P P G PPPPP
Sbjct: 765 -------PGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 233 GXXXPXXXXXLXXXXXPPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXG 400
G P + PP P G PP GG PP GG PP G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
GG P P PPP GG PPPP GG PPP PPG
Sbjct: 749 GGLPPISGGPPPPPPPP----GGCPPPPP--PPPPGGFKGGPPP---PPPPG 791
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG 304
GG P P PPP PPPP PPP GG
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 378 GXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
G PPPP GG PPP G PP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP--GGLPPITGG 741
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP GG P GG + PPPP PP P G
Sbjct: 730 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGG-----CPPPPPPPPPGGF 780
Query: 513 XGLPXPPPP 539
G P PPPP
Sbjct: 781 KGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 445 GGGXXFXKXTXPPPPPXXXXXXWGXPPPP 359
GG T PPPP G PPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPP 729
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = -2
Query: 417 PXPXPPPXXXXX--GGXXPPPPXXXXXX--GGXXXXPPPXGGAXPP 292
P P PPP GG PPPP GG PPP GG PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP GG P GG PPPP PP P GG
Sbjct: 715 PPPGLPPITGGPPPPPPP-------GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 513 XGLPXPPPP 539
P PPPP
Sbjct: 768 CPPPPPPPP 776
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXX-GGXXXXPPPXGGAXPPGXGG 280
P PP GG PPPP G PPP GG PP GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISGG 757
Score = 32.3 bits (70), Expect = 0.44
Identities = 28/91 (30%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +2
Query: 281 PPXPGGXAPPXG-----GGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP GG PP G GG PP GG PP GG PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPP 764
Query: 446 XXXXFXXXXXXXXXPXXXPXXGXXFAPPPPP 538
P P G PPPPP
Sbjct: 765 -------PGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 233 GXXXPXXXXXLXXXXXPPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXG 400
G P + PP P G PP GG PP GG PP G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
GG P P PPP GG PPPP GG PPP PPG
Sbjct: 749 GGLPPISGGPPPPPPPP----GGCPPPPP--PPPPGGFKGGPPP---PPPPG 791
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG 304
GG P P PPP PPPP PPP GG
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 378 GXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
G PPPP GG PPP G PP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP--GGLPPITGG 741
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP GG P GG + PPPP PP P G
Sbjct: 730 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGG-----CPPPPPPPPPGGF 780
Query: 513 XGLPXPPPP 539
G P PPPP
Sbjct: 781 KGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 445 GGGXXFXKXTXPPPPPXXXXXXWGXPPPP 359
GG T PPPP G PPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPP 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = -2
Query: 417 PXPXPPPXXXXX--GGXXPPPPXXXXXX--GGXXXXPPPXGGAXPP 292
P P PPP GG PPPP GG PPP GG PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP GG P GG PPPP PP P GG
Sbjct: 298 PPPGLPPITGGPPPPPPP-------GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 513 XGLPXPPPP 539
P PPPP
Sbjct: 351 CPPPPPPPP 359
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXX-GGXXXXPPPXGGAXPPGXGG 280
P PP GG PPPP G PPP GG PP GG
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISGG 340
Score = 32.3 bits (70), Expect = 0.44
Identities = 28/91 (30%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +2
Query: 281 PPXPGGXAPPXG-----GGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP GG PP G GG PP GG PP GG PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPP 347
Query: 446 XXXXFXXXXXXXXXPXXXPXXGXXFAPPPPP 538
P P G PPPPP
Sbjct: 348 -------PGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 233 GXXXPXXXXXLXXXXXPPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXG 400
G P + PP P G PP GG PP GG PP G
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
GG P P PPP GG PPPP GG PPP PPG
Sbjct: 332 GGLPPISGGPPPPPPPP----GGCPPPPP--PPPPGGFKGGPPP---PPPPG 374
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG 304
GG P P PPP PPPP PPP GG
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 378 GXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
G PPPP GG PPP G PP GG
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPP--GGLPPITGG 324
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP GG P GG + PPPP PP P G
Sbjct: 313 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGG-----CPPPPPPPPPGGF 363
Query: 513 XGLPXPPPP 539
G P PPPP
Sbjct: 364 KGGPPPPPP 372
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 445 GGGXXFXKXTXPPPPPXXXXXXWGXPPPP 359
GG T PPPP G PPPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPP 312
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXG-GXXXXPPPXGGAXPPGXGG 280
P PPP GG PPPP G G PPP PP G
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGA--XPPGXGG 280
P P PPP PPPP G PPP + PPG GG
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP G G P G PPPP PP P G
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 513 XGLPXPPPP 539
G+ PPPP
Sbjct: 360 PGMYPPPPP 368
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -2
Query: 417 PXPXPPP--XXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P P PP GG PPPP GG PPP + PG
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 361
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP G PPP P G
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPP PPP PPG G
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG 315
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPPXXXXF 460
PP P PP GG PP GG PP G G + PPP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGG---MPPPPPPRYPSAGPGMY----PPP----- 366
Query: 461 XXXXXXXXXPXXXPXXGXXFAPPPPP 538
P P PPPPP
Sbjct: 367 -----PPSRPPAPPSGHGMIPPPPPP 387
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = -2
Query: 417 PXPXPPPXXXXXG-----GXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P P PPP G G PPPP G PPP PPG
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP----PPPG 340
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Frame = -2
Query: 417 PXPXPPPXXXXX-----GGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P P PPP G PPPP G PPP G PG
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXG-GXXXXPPPXGGAXPPGXGG 280
P PPP GG PPPP G G PPP PP G
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGA--XPPGXGG 280
P P PPP PPPP G PPP + PPG GG
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +3
Query: 333 PPPXXXXYXGGGGSPHXXXXXXGGGGGXVXXXXXXPPPPXXXFXXXXXXXXPPXXXPXGG 512
PPP G G P G PPPP PP P G
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 513 XGLPXPPPP 539
G+ PPPP
Sbjct: 370 PGMYPPPPP 378
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -2
Query: 417 PXPXPPP--XXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P P PP GG PPPP GG PPP + PG
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 371
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP G PPP P G
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPP PPP PPG G
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG 325
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPPXXXXF 460
PP P PP GG PP GG PP G G + PPP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGG---MPPPPPPRYPSAGPGMY----PPP----- 376
Query: 461 XXXXXXXXXPXXXPXXGXXFAPPPPP 538
P P PPPPP
Sbjct: 377 -----PPSRPPAPPSGHGMIPPPPPP 397
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = -2
Query: 417 PXPXPPPXXXXXG-----GXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P P PPP G G PPPP G PPP PPG
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP----PPPG 350
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Frame = -2
Query: 417 PXPXPPPXXXXX-----GGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P P PPP G PPPP G PPP G PG
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P PPP GG PPPP G PPP GA PP
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMM-----GGIPPPPPMFGAPPP 116
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
PPP GG PPPP GG PP GG PP
Sbjct: 75 PPPPGP--GGIPPPPPMFA---GGIPPPPPMMGGIPPP 107
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP P G PP G PP GG PP G F PPP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMF---AGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXX-LXGGGGXXPPXXXXXGGGXGXG 418
PP P G G PP L GGGG PP GGG G G
Sbjct: 35 PPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGGG 81
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXP-P--PPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
GGG P P P P GG P PP GG PP A G GG
Sbjct: 23 GGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGG 80
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGG 304
GGG P P P GG PPP G P P GG
Sbjct: 44 GGGLALPQLP-PLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAPIGG 89
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Frame = -1
Query: 535 GGGXGKPXPPXGXXXGGXXXXXXXXKXXXGG-----GGXXFXKXTXPPPPPXXXXXXWGX 371
GGG G P PP G G GG + P PPP +G
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGY 734
Query: 370 PPPP 359
PPPP
Sbjct: 735 PPPP 738
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = -2
Query: 417 PXPXPPPXXXXXG-GXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G G PPP PPP G P
Sbjct: 719 PYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQP 761
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Frame = -1
Query: 535 GGGXGKPXPPXGXXXGGXXXXXXXXKXXXGG-----GGXXFXKXTXPPPPPXXXXXXWGX 371
GGG G P PP G G GG + P PPP +G
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGY 734
Query: 370 PPPP 359
PPPP
Sbjct: 735 PPPP 738
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = -2
Query: 417 PXPXPPPXXXXXG-GXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G G PPP PPP G P
Sbjct: 719 PYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQP 761
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
P PPP G PPPP GG P G+ PG
Sbjct: 40 PPPPPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYGPG 80
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXG 418
PP GG P G G PP GG G PP GG G G
Sbjct: 174 PPGHGGMGGPPGHGGQGGPPG----HGGMGGPPPGQGGPGGPGGPG 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXG 418
PP GG P G G PP GG G PP GG G G
Sbjct: 454 PPGHGGMGGPPGHGGQGGPPG----HGGMGGPPPGQGGPGGPGGPG 495
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = -2
Query: 444 GGGXXXXXXPXPXP---PPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPG 289
GGG P P P PP GG PPPP P GGA P G
Sbjct: 25 GGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYG---APAGGAYPVG 76
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPP 358
P P PPP GG PPPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPP 141
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 399 PXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P GG PPPP G PP GA PPG G
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYGPPPTGFPPV-GAPPPGAAG 463
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXG--GGXGXGXFXKXXPPP 445
P PGG PP GG G GG PP G G G PPP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 402 PPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P GG PPPP G GG PP GG
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -1
Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGGXXFXKXTXPPPPPXXXXXXWGXPPPP 359
G G G PP GG GGGG + PPPP PPPP
Sbjct: 20 GAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPP---------PPPP 70
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -1
Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGGXXFXKXTXPPPPPXXXXXXWGXPPPP 359
G G G PP GG GGGG + PPPP PPPP
Sbjct: 20 GAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPP---------PPPP 70
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P P P GG P P G PPP G PPG G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPR-----GGPGAPPPPGMRPPPGAPG 803
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P P P GG P P G PPP G PPG G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPR-----GGPGAPPPPGMRPPPGAPG 803
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +2
Query: 281 PPXPGGXAPPX--GGGXXXXPPXXXXLXGGGGXXP 379
PP PG PP GGG PP G GG P
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P PPP GG PPPP G G PP
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPP 578
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPP--XXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G PPPP G GG PP
Sbjct: 536 PTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPP 313
P P P G PPPP G PPP
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P P P GG P P G PPP G PPG G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPR-----GGPGAPPPPGMRPPPGAPG 803
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +2
Query: 281 PPXPGGXAPPX--GGGXXXXPPXXXXLXGGGGXXP 379
PP PG PP GGG PP G GG P
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P P P GG P P G PPP G PPG G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPR-----GGPGAPPPPGMRPPPGAPG 803
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = -2
Query: 417 PXPXPPPXXXXX---GGXXPPPPXXXXXXGGXXXXPPPX--GGAXPPGXGG 280
P P PPP G PPPP PPP G PP GG
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 411 PXPPPXXXXX----GGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP PP GG+ PP G
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G PPP GG PPP G PP
Sbjct: 297 PPPPPPPRGSPPTGSLPPP-----QAGG---SPPPAGTGSPP 330
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP GG PP G PP G PP GG PPP
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP---QAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = -2
Query: 417 PXPXPPPXXXXX---GGXXPPPPXXXXXXGGXXXXPPPX--GGAXPPGXGG 280
P P PPP G PPPP PPP G PP GG
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 411 PXPPPXXXXX----GGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP PP GG+ PP G
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G PPP GG PPP G PP
Sbjct: 318 PPPPPPPRGSPPTGSLPPP-----QAGG---SPPPAGTGSPP 351
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP GG PP G PP G PP GG PPP
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP---QAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = -2
Query: 417 PXPXPPPXXXXX---GGXXPPPPXXXXXXGGXXXXPPPX--GGAXPPGXGG 280
P P PPP G PPPP PPP G PP GG
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = -2
Query: 411 PXPPPXXXXX----GGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PPP G PPPP PP GG+ PP G
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPP 292
P P PPP G PPP GG PPP G PP
Sbjct: 303 PPPPPPPRGSPPTGSLPPP-----QAGG---SPPPAGTGSPP 336
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPP 445
PP GG PP G PP G PP GG PPP
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP---QAGGSPPPAGTGSPPPPP 339
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PP G PP P G P GG PPG G
Sbjct: 144 PITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAG 189
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXX-PXGGXGLPXPPPP 539
PPPP PP P G G P PPPP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = -2
Query: 444 GGGXXXXXXPXPX----PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXP 295
GG P P PP GG PPP G PPP G A P
Sbjct: 19 GGATQNSCCPPPQCCGPPPACGNPCGGGFGPPPPPFGPVGYALPPPPPNGYALP 72
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXX-PXGGXGLPXPPPP 539
PPPP PP P G G P PPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 438 PPPPXXXFXXXXXXXXPPXXX-PXGGXGLPXPPPP 539
PPPP PP P G G P PPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/78 (25%), Positives = 21/78 (26%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGGXXXXXNXXXXXGXX 238
P P PP G P P G P P G PPG G G
Sbjct: 154 PCPAGPPGPPGPDG--PAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPD 211
Query: 237 XPKKKXXGPPXKXXGTVG 184
P + P G G
Sbjct: 212 GPAGESTYPEPAGPGPAG 229
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PP G PPPP PPP G PP GG
Sbjct: 1452 PMRGMPPLGMMRGRGGPPPPRGMNSP--MRGMPPPMRGGGPPMRGG 1495
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 405 PPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXG 283
PPP G PPP G PPP G PP G
Sbjct: 1560 PPPHGGMNGWRGGPPPPRG---GSHCQGPPPLMGGPPPRLG 1597
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 360 GGGGSPHXXXXXXGGGGGXVXXXXXXPPPP 449
GGGG GGGGG PPPP
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGGXXFXKXTXPPPPP 398
GGGG G G GG GGGG PPPPP
Sbjct: 75 GGGGCG-----GGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 360 GGGGSPHXXXXXXGGGGGXVXXXXXXPPPP 449
GGGGS GGGG PPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGG 437
GGGG P P G GG GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 360 GGGGSPHXXXXXXGGGGGXVXXXXXXPPPP 449
GGGG GGGG PPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 360 GGGGSPHXXXXXXGGGGGXVXXXXXXPPPP 449
GGGGS GGGG PPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 538 GGGGXGKPXPPXGXXXGGXXXXXXXXKXXXGGGG 437
GGGG P P G GG GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 360 GGGGSPHXXXXXXGGGGGXVXXXXXXPPPP 449
GGGG GGGG PPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/85 (23%), Positives = 21/85 (24%)
Frame = -2
Query: 534 GGGGANXHPXXGXXXGXXXXXXXXXKXXXXGGGXXXXXXPXPXPPPXXXXXGGXXPPPPX 355
G GA+ P G G P PP G P
Sbjct: 129 GEAGADGEPGEAGQDGAAGEAGSADTYAGAAGNCITCPAGPPGPPGPDGNAGPAGPAGAA 188
Query: 354 XXXXXGGXXXXPPPXGGAXPPGXGG 280
G P P G A PPG G
Sbjct: 189 GPDGEGAGYAEPGPAGPAGPPGPDG 213
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 26.6 bits (56), Expect(2) = 5.8
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 8/58 (13%)
Frame = -2
Query: 444 GGGXXXXXXPXPXPPPXXXXXGGXXP--------PPPXXXXXXGGXXXXPPPXGGAXP 295
GGG P P PPP P P GG P P GGA P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGGAAP 79
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 321 PPPXGGAXPPGXGG 280
PP G A PP GG
Sbjct: 85 PPAAGYAAPPPAGG 98
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PP G PP P G P G A PPG G
Sbjct: 149 PCPGGPPGPAGPAG--PPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PP G PP P G P G A PPG G
Sbjct: 149 PCPGGPPGPAGPAG--PPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PP G PP P G P G + PPG G
Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPG 267
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXG---GAXPPG 289
P PPP G PPPP G PPP G G P G
Sbjct: 36 PYGAPPPPVGAGVGYAPPPP---RPYGATYAPPPPMGIGAGVNPSG 78
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PP G PP P G P G A PPG G
Sbjct: 149 PCPGGPPGPAGPAG--PPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PP G PP P G P G + PPG G
Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPG 267
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 417 PXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P P PP G PP P G P G A PPG G
Sbjct: 149 PCPGGPPGPAGPAG--PPGPPGPDGNPGSPAGPSGPGPAGPPGPAG 192
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 381 GGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
G PP P G P P G A PPG G
Sbjct: 212 GPAGPPGPPGPNGEAGAGSGPGPEGPAGPPGPNG 245
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Frame = -2
Query: 402 PPXXXXXGGXXPPPPXXXXXXGGXXXXPPP----XGGAXPP 292
PP PPPP GG PPP GG PP
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +2
Query: 281 PPXPGGXAPPXGGGXXXXPPXXXXLXGGGGXXPPXXXXXGGGXGXGXFXKXXPPPXXXXF 460
PP P G PP G PP G PP G G G PPP
Sbjct: 726 PPPPQG-IPPMGFDPNKPPPPMFQQGFNAGAPPPPF-----GRGAGPMSSFPPPPR---- 775
Query: 461 XXXXXXXXXPXXXPXXGXXFAPPPP 535
P G PPPP
Sbjct: 776 GGMHHMPPPPSFRGGRGGHGGPPPP 800
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -2
Query: 411 PXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
P PP G PP P G P G + PPG G
Sbjct: 229 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPG 272
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 412 PPPPPXXXXXXWGXPPPP 359
PPPPP G PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPP 811
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 412 PPPPPXXXXXXWGXPPPP 359
PPPPP G PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPP 811
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = -2
Query: 441 GGXXXXXXPXPXPPPXXXXX-----GGXXPPPPXXXXXXGGXXXXPPPXG 307
GG P P PPP GG PPPP G PPP G
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPL------GIIPPPPPPG 805
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 441 GGXXXXXXPXPXPPPXXXXXGGXXPPPPXXXXXXGGXXXXPPPXGGAXPPGXGG 280
GG P P PP GG P P G P G PG G
Sbjct: 249 GGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDG 302
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = -2
Query: 441 GGXXXXXXPXPXPPPXXXXX-----GGXXPPPPXXXXXXGGXXXXPPPXG 307
GG P P PPP GG PPPP G PPP G
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPL------GIIPPPPPPG 805
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,241,423
Number of Sequences: 27780
Number of extensions: 250898
Number of successful extensions: 2514
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -