Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A01
         (1371 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q948Y6 Cluster: VMP4 protein; n=1; Volvox carteri f. na...    36   1.9  
UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3; Eukary...    36   2.5  
UniRef50_A0BFK7 Cluster: Chromosome undetermined scaffold_104, w...    36   2.5  
UniRef50_Q84ZC4 Cluster: Pentatricopeptide (PPR) repeat-containi...    35   4.3  
UniRef50_A4R5L4 Cluster: Putative uncharacterized protein; n=1; ...    35   5.7  
UniRef50_Q2H4B1 Cluster: Putative uncharacterized protein; n=1; ...    34   7.5  
UniRef50_Q4A373 Cluster: Putative lectin protein precursor; n=1;...    34   10.0 
UniRef50_Q00X46 Cluster: Chromosome 13 contig 1, DNA sequence; n...    34   10.0 

>UniRef50_Q948Y6 Cluster: VMP4 protein; n=1; Volvox carteri f.
           nagariensis|Rep: VMP4 protein - Volvox carteri f.
           nagariensis
          Length = 1143

 Score = 36.3 bits (80), Expect = 1.9
 Identities = 20/59 (33%), Positives = 20/59 (33%)
 Frame = +1

Query: 673 PPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGMXPPXGR 849
           PPP          P P   P PS     S  PP S   PPS  P      P   PP  R
Sbjct: 538 PPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPRHPPSPPPRPR 596



 Score = 35.5 bits (78), Expect = 3.3
 Identities = 19/56 (33%), Positives = 19/56 (33%)
 Frame = +1

Query: 673 PPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGMXPP 840
           PPP          P P   P PS     S  PP S   PPS  P      P   PP
Sbjct: 526 PPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPPP 581


>UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3;
           Eukaryota|Rep: Predicted membrane protein - Ostreococcus
           tauri
          Length = 1449

 Score = 35.9 bits (79), Expect = 2.5
 Identities = 21/56 (37%), Positives = 22/56 (39%)
 Frame = +1

Query: 673 PPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGMXPP 840
           PPPS        TP P   P PS     S  PP S + PPS  P      P   PP
Sbjct: 810 PPPSPPPPPNPPTP-PSPPPPPSPPPPPSSPPPPSPSPPPSPPPAPSPPPPPNPPP 864



 Score = 34.7 bits (76), Expect = 5.7
 Identities = 21/63 (33%), Positives = 23/63 (36%)
 Frame = +1

Query: 652 PXXVEIXPPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGM 831
           P  +   PPP  S       P P   P+P   T  S  PP S   PPS  P      P  
Sbjct: 792 PPPLPPSPPPPPSPPPPPPPPSPPPPPNPP--TPPSPPPPPSPPPPPSSPPPPSPSPPPS 849

Query: 832 XPP 840
            PP
Sbjct: 850 PPP 852


>UniRef50_A0BFK7 Cluster: Chromosome undetermined scaffold_104,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_104,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1152

 Score = 35.9 bits (79), Expect = 2.5
 Identities = 17/63 (26%), Positives = 20/63 (31%)
 Frame = +1

Query: 652 PXXVEIXPPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGM 831
           P    + PPP          P P   P P  +      PP    GPP   P   +  P  
Sbjct: 597 PNAPSLPPPPPPPPPPVKSAPLPPPPPPPKIAAPPPPPPPPMKAGPPPPPPPPGVPRPPG 656

Query: 832 XPP 840
            PP
Sbjct: 657 GPP 659


>UniRef50_Q84ZC4 Cluster: Pentatricopeptide (PPR) repeat-containing
            protein-like; n=6; Magnoliophyta|Rep: Pentatricopeptide
            (PPR) repeat-containing protein-like - Oryza sativa
            subsp. japonica (Rice)
          Length = 262

 Score = 35.1 bits (77), Expect = 4.3
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 999  HXGLPXXXXSTXSLHTHSLXPXPPXLXSPSPXXPXTXLSRR 1121
            +  LP    S+ S  THSL P PP L  P P  P     RR
Sbjct: 19   YKALPLSSPSSSSSSTHSLLPRPPALWPPPPPPPPHGCERR 59


>UniRef50_A4R5L4 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 737

 Score = 34.7 bits (76), Expect = 5.7
 Identities = 18/63 (28%), Positives = 21/63 (33%)
 Frame = +1

Query: 652 PXXVEIXPPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGM 831
           P   +  PPPS         P P   P P+ S      PP +   PP   P      P  
Sbjct: 397 PPPPDEPPPPSEPPPPPNEPPPPDEPPPPNESPPPDAPPPPNEPPPPDAPPPPDAPPPPD 456

Query: 832 XPP 840
            PP
Sbjct: 457 APP 459


>UniRef50_Q2H4B1 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 592

 Score = 34.3 bits (75), Expect = 7.5
 Identities = 21/72 (29%), Positives = 25/72 (34%)
 Frame = +1

Query: 673 PPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGMXPPXGRX 852
           PPPSR          P   P  + +      PP S   PP+      +  P   PP  R 
Sbjct: 370 PPPSREPVHAHTPTAPPPLPPKAPAASAPPLPPPSSRPPPTLPARSPVPPPPAPPPPRR- 428

Query: 853 XXXXLHXXGLPP 888
               LH   LPP
Sbjct: 429 ---SLHRVPLPP 437


>UniRef50_Q4A373 Cluster: Putative lectin protein precursor; n=1;
            Emiliania huxleyi virus 86|Rep: Putative lectin protein
            precursor - Emiliania huxleyi virus 86
          Length = 1994

 Score = 33.9 bits (74), Expect = 10.0
 Identities = 20/56 (35%), Positives = 20/56 (35%)
 Frame = +1

Query: 673  PPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGMXPP 840
            PPP  S       P P   P P  S   S  PP S   PPS  P      P   PP
Sbjct: 1228 PPPPPSPPPSPPPPSPPPTPPPPLSPPPSLPPPSSP--PPSPNPPPAPPPPSPPPP 1281


>UniRef50_Q00X46 Cluster: Chromosome 13 contig 1, DNA sequence; n=5;
           root|Rep: Chromosome 13 contig 1, DNA sequence -
           Ostreococcus tauri
          Length = 1990

 Score = 33.9 bits (74), Expect = 10.0
 Identities = 19/56 (33%), Positives = 19/56 (33%)
 Frame = +1

Query: 673 PPPSRSXXXXXXTPXPXXXPHPSXSTXRSXXPPDSXTGPPSXXPXXXIXXPGMXPP 840
           PPP          P P   P PS S      PP S   PPS  P      P   PP
Sbjct: 801 PPPPSPTPPLPPPPSPFPPPSPSPSPPPPSPPPPSPP-PPSPPPPSPFPPPAPPPP 855


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,437,782
Number of Sequences: 1657284
Number of extensions: 5039189
Number of successful extensions: 18359
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14622
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 142942675927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)