Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_A01
         (1371 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC044636-1|AAH44636.1|  520|Homo sapiens YLPM1 protein protein.        33   3.2  
AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens ...    33   3.2  
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.     33   3.2  
BC110383-1|AAI10384.1|  594|Homo sapiens FIP1 like 1 (S. cerevis...    31   9.8  
BC052959-1|AAH52959.1|  559|Homo sapiens FIP1L1 protein protein.       31   9.8  
BC024016-1|AAH24016.1|  559|Homo sapiens FIP1L1 protein protein.       31   9.8  
BC011543-1|AAH11543.1|  328|Homo sapiens FIP1L1 protein protein.       31   9.8  
AY366510-1|AAQ88277.1|  594|Homo sapiens pre-mRNA 3'end processi...    31   9.8  

>BC044636-1|AAH44636.1|  520|Homo sapiens YLPM1 protein protein.
          Length = 520

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +2

Query: 719 PXPXPTXPXP-LXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P P PT P P L    PP    PALP   P      P  PP
Sbjct: 355 PPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 395


>AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33731 fis, clone BRAWH2017685, moderately
           similar to Mus musculus mRNA for nuclear protein ZAP. ).
          Length = 723

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +2

Query: 719 PXPXPTXPXP-LXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P P PT P P L    PP    PALP   P      P  PP
Sbjct: 96  PPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 136


>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
          Length = 1766

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +2

Query: 719 PXPXPTXPXP-LXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P P PT P P L    PP    PALP   P      P  PP
Sbjct: 153 PPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 193


>BC110383-1|AAI10384.1|  594|Homo sapiens FIP1 like 1 (S.
           cerevisiae) protein.
          Length = 594

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = +2

Query: 719 PXPXPTXPXPLXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P   PT   P   L PP T   A PL  P      PG PP
Sbjct: 362 PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 401


>BC052959-1|AAH52959.1|  559|Homo sapiens FIP1L1 protein protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = +2

Query: 719 PXPXPTXPXPLXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P   PT   P   L PP T   A PL  P      PG PP
Sbjct: 327 PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 366


>BC024016-1|AAH24016.1|  559|Homo sapiens FIP1L1 protein protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = +2

Query: 719 PXPXPTXPXPLXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P   PT   P   L PP T   A PL  P      PG PP
Sbjct: 327 PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 366


>BC011543-1|AAH11543.1|  328|Homo sapiens FIP1L1 protein protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = +2

Query: 719 PXPXPTXPXPLXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P   PT   P   L PP T   A PL  P      PG PP
Sbjct: 96  PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 135


>AY366510-1|AAQ88277.1|  594|Homo sapiens pre-mRNA 3'end processing
           factor FIP1 protein.
          Length = 594

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = +2

Query: 719 PXPXPTXPXPLXXLXPPRTXXPALPLXXPXXXSXXPGXPP 838
           P   PT   P   L PP T   A PL  P      PG PP
Sbjct: 362 PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPP 401


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,796,632
Number of Sequences: 237096
Number of extensions: 1016076
Number of successful extensions: 3151
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2902
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19895715642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)