Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P23
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565...    29   5.1  
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624...    29   5.1  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    29   5.1  
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910...    28   9.0  
10_08_0226 - 16001958-16002527                                         28   9.0  
05_03_0164 - 9078814-9079908                                           28   9.0  

>11_01_0687 -
           5651002-5651453,5651535-5651951,5652621-5653338,
           5654106-5654417,5654482-5654814
          Length = 743

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +2

Query: 227 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKXGYNREIFNDDRGKLTG-QAYGTRVLG 403
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 404 P--GGDSTNYGG 433
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>10_08_0095 +
           14760292-14760624,14760689-14761000,14761768-14762489,
           14762905-14763187,14763419-14763650,14763736-14764187
          Length = 777

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +2

Query: 227 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKXGYNREIFNDDRGKLTG-QAYGTRVLG 403
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 404 P--GGDSTNYGG 433
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 416  STNYGGRLDWANKNAQATIDLNRQI 490
            S+ +GG L W N + ++T+D +RQ+
Sbjct: 960  SSLHGGSLPWKNTDFESTVDFDRQL 984


>11_06_0143 +
           20589574-20589684,20590256-20590873,20590943-20591010,
           20591159-20591234,20591311-20591372,20591452-20591603,
           20591889-20592052,20592129-20592317,20592417-20592538,
           20592620-20592827,20593238-20593291,20593457-20593626,
           20594265-20594355,20595405-20595529,20596372-20596444,
           20596822-20596914,20597482-20597728,20598305-20598364,
           20598461-20598590,20599008-20599014
          Length = 939

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +2

Query: 269 GGGKVFG-TLGQNDDGLFGKXGYNREIFNDDRGKLTGQAYGTRVLGPGGDS-TNYGGRLD 442
           G G   G T+G +DDG   K   + +  +   G+  G A G R  G GG    N+G R D
Sbjct: 177 GAGAAHGKTIGLDDDGEEDKMDEDAKTPSKAAGRGRGGASGGRGRGGGGRGFMNFGERKD 236

Query: 443 WANK 454
             +K
Sbjct: 237 PPHK 240


>10_08_0226 - 16001958-16002527
          Length = 189

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
 Frame = +2

Query: 269 GGGKVFGTLGQNDDGLFGKXGYNREIFNDDRGKLTGQA-YGTRVLGPGGDSTNYGGRLDW 445
           G G   G++ Q   G     G    +     G + G   YGT      G +   GG    
Sbjct: 91  GQGSSSGSVSQGG-GSASAGGGGGGVAGGQAGGVDGSGGYGTGTGSGTGSAAADGGASPT 149

Query: 446 ANK---NAQATIDLNRQIGGRSGMTASGSG 526
           ++    NA AT D N   GG+SG + SG G
Sbjct: 150 SSPPYANANATGDGNGNGGGQSGGSGSGGG 179


>05_03_0164 - 9078814-9079908
          Length = 364

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +2

Query: 395 VLGPGGDSTNYGGRLDWANKNAQATIDLNRQIGGRSGMTASGSGVWDLDKNTHFSAGGMV 574
           V+G  G +++    LD+ +  A A +  NR+ G ++     G  +  L  N H S G   
Sbjct: 85  VVGDAGATSDGLLLLDFTDIRATARVVANRRAGAQAQAQQQGKKLTGLSFNLHNSRGDTQ 144

Query: 575 SKEFG--HKRPDV 607
            +E    +  PD+
Sbjct: 145 ERELAGVNTNPDI 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,302,204
Number of Sequences: 37544
Number of extensions: 464989
Number of successful extensions: 1252
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)