Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P22
(892 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 106 9e-22
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 100 4e-20
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 84 5e-15
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 62 2e-08
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 61 4e-08
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 56 1e-06
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 53 1e-05
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 52 3e-05
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 52 3e-05
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 44 0.004
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 40 0.064
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 38 0.26
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.60
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 36 1.4
UniRef50_UPI0000EBDDCA Cluster: PREDICTED: hypothetical protein;... 35 3.2
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 106 bits (254), Expect = 9e-22
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 104 QVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 283
QVFGRKKTATAVA+CKRG+G NGRPL+++EPR LQYKL EP+LLLGKE+F+ VDIRV
Sbjct: 11 QVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRV 70
Query: 284 TVKGWVVM*HKFTLSRQAISK 346
VKG + + + RQ+ISK
Sbjct: 71 RVKGGGHVAQIYAI-RQSISK 90
Score = 55.6 bits (128), Expect = 2e-06
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +1
Query: 298 GGHVAQVYAIPTSYFKRL*SPSTRNM*TKPQRRKIKDILVQYDRSLLVG*PRVAASPKKX 477
GGHVAQ+YAI S K L + + + + +++IKDIL+QYDR+LLV PR S KK
Sbjct: 75 GGHVAQIYAIRQSISKALVAYYQKYV-DEASKKEIKDILIQYDRTLLVADPRRCES-KKF 132
Query: 478 GWSXXPRARYQ 510
G RARYQ
Sbjct: 133 G-GPGARARYQ 142
Score = 40.7 bits (91), Expect = 0.049
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +3
Query: 345 KALIAFYQKYVDEASKKENQRHPSSIR*EFAGGL---TPRRCEPKK 473
KAL+A+YQKYVDEASKKE + I ++ L PRRCE KK
Sbjct: 90 KALVAYYQKYVDEASKKEIK----DILIQYDRTLLVADPRRCESKK 131
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 100 bits (240), Expect = 4e-20
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2
Query: 104 QVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 283
QV GRKKTATAVAYCKRG+G NGRPL+ +EP L+YKL EPILLLGKE+F+ VDIR+
Sbjct: 13 QVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKERFAGVDIRI 72
Query: 284 TVKGWVVM*HKFTLSRQAISK 346
VKG + + + RQAISK
Sbjct: 73 RVKGGGNVAQIYAI-RQAISK 92
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +1
Query: 298 GGHVAQVYAIPTSYFKRL*SPSTRNM*TKPQRRKIKDILVQYDRSLLVG*PRVAASPKKX 477
GG+VAQ+YAI + K L + + + + +++IKD L+QYDR+LLV PR PKK
Sbjct: 77 GGNVAQIYAIRQAISKALVAYYQKYV-DEQSKKEIKDTLIQYDRTLLVADPR-RCEPKKF 134
Query: 478 GWSXXPRARYQ 510
G RARYQ
Sbjct: 135 G-GPGARARYQ 144
Score = 41.5 bits (93), Expect = 0.028
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +3
Query: 345 KALIAFYQKYVDEASKKENQRHPSSIR*EFAGGLTPRRCEPKK 473
KAL+A+YQKYVDE SKKE + PRRCEPKK
Sbjct: 92 KALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVA-DPRRCEPKK 133
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 83.8 bits (198), Expect = 5e-15
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +2
Query: 104 QVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 283
Q FG+KK+ATAVA+ K G G NG P+ LVEP +L++K+ EP+LL+G +KFS +DIRV
Sbjct: 8 QTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRV 67
Query: 284 TVKGWVVM*HKFTLSRQAISKG 349
V G + + + RQAI+KG
Sbjct: 68 RVTGGGHVSQVYAI-RQAIAKG 88
Score = 37.9 bits (84), Expect = 0.34
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +1
Query: 298 GGHVAQVYAIPTSYFKRL*SPSTRNM*TKPQRRKIKDILVQYDRSLLVG*PRVAASPKKX 477
GGHV+QVYAI + K L + + + + + ++K YDR+LL+ R PKK
Sbjct: 72 GGHVSQVYAIRQAIAKGLVAYHQKYV-DEQSKNELKKAFTSYDRTLLIADSR-RPEPKKF 129
Query: 478 GWSXXPRARYQ 510
G R+R+Q
Sbjct: 130 G-GKGARSRFQ 139
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 71.3 bits (167), Expect = 3e-11
Identities = 29/52 (55%), Positives = 43/52 (82%)
Frame = +2
Query: 110 FGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 265
FG+KKTATAVA+CK G G NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 9 FGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +2
Query: 113 GRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 292
G+KK + AVA+ K G G+ N PL LV P +L+ K+ EPI++LG+ F +D+ + V
Sbjct: 29 GKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMNIKVA 88
Query: 293 GWVVM*HKFTLSRQAISKG 349
G + + + RQAIS+G
Sbjct: 89 GGGHVSQIYAV-RQAISRG 106
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +2
Query: 104 QVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 283
Q G++KTA A A + G G NG+P++++EP + ++ + EP++L G+E ++ VDI V
Sbjct: 5 QTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDV 64
Query: 284 TVKG 295
V+G
Sbjct: 65 KVQG 68
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 56.0 bits (129), Expect = 1e-06
Identities = 40/119 (33%), Positives = 58/119 (48%)
Frame = +2
Query: 104 QVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 283
Q+F K+ A AV C+ G G N PL+++ LQYKL E LLL KE+ + +DI V
Sbjct: 22 QIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHV 81
Query: 284 TVKGWVVM*HKFTLSRQAISKGSDRLLPEICRRSLKEGKSKTS*FNTIGVCWWADPASL 460
VKG + + + Q ISK P+ + +E K + CWW P ++
Sbjct: 82 RVKGSGHVVQIYAV-LQYISKALVPCYPKYVDEASEEIKDTLT-----RPCWWFTPVAM 134
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 113 GRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 292
G++K A A A + G G NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 293 GWVVM*HKFTLSRQAISKG 349
G VM + R AI++G
Sbjct: 71 GGGVM-GQADAVRMAIARG 88
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 51.6 bits (118), Expect = 3e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 104 QVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRV 283
Q FG+KK A A+ K+G G NG P++LV P ++ K+ EP +LG + ++ +
Sbjct: 4 QCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFDI 63
Query: 284 TVKGWVVM*HKFTLSRQAISK 346
KG + + + RQ+ISK
Sbjct: 64 FSKGGGKVSQIYAI-RQSISK 83
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 51.6 bits (118), Expect = 3e-05
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 104 QVFGRKKTATAVA-YCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 280
Q FG+KKTA AVA K N NG PL + P L+ K+ E I ++G + +S + I
Sbjct: 13 QTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSRLRID 72
Query: 281 VTVKGWVVM*HKFTLSRQAISKG 349
V V G + + +RQAI+KG
Sbjct: 73 VAVHGGGQVSQAYA-ARQAIAKG 94
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +1
Query: 298 GGHVAQVYAIPTSYFKRL*SPSTRNM*TKPQRRKIKDILVQYDRSLLVG*PRVAASPKKX 477
GGH +QVYAI + K L + + + + + ++K VQYDR+LLV R A PKK
Sbjct: 84 GGHTSQVYAIRQAIAKSLVAYYQKYV-DEHSKNQLKQAFVQYDRTLLVADNR-RAEPKKF 141
Query: 478 GWSXXPRARYQ 510
G RARYQ
Sbjct: 142 G-GRGARARYQ 151
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 230 EPILLLGKEKFSMVDIRVTVKGWVVM*HKFTLSRQAISK 346
EP+L++G +KF+ VDIRV V G + + RQAI+K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAI-RQAIAK 99
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +2
Query: 101 RQVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 280
+QVFG KK A A+ + K + L++ EP QY+L +PIL LGKE+F+ V I
Sbjct: 29 KQVFGCKKKAIAM-HAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFARVGIW 87
Query: 281 VTVKG 295
V V G
Sbjct: 88 VRVNG 92
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 40.3 bits (90), Expect = 0.064
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 113 GRKKTATAVAYCKRGHGNAACNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 289
GR+KT+TA + +G GN NG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 290 KG 295
KG
Sbjct: 66 KG 67
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 38.3 bits (85), Expect = 0.26
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 113 GRKKTATAVAYCKRGHGNAACNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 286
G++K A A + K G GN NG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 287 VKG 295
V G
Sbjct: 69 VLG 71
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 37.1 bits (82), Expect = 0.60
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2
Query: 92 PSGRQVFGRKKTATAVAYCKRGHG 163
P Q FGRKKTA AV+YCK G G
Sbjct: 10 PGTVQCFGRKKTAVAVSYCKPGRG 33
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 35.9 bits (79), Expect = 1.4
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 113 GRKKTATAVAYCKRGHGNAACNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 289
GR+K A G G CNGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 290 KG 295
G
Sbjct: 120 GG 121
>UniRef50_UPI0000EBDDCA Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 92
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 92 PSGRQVFGRKKTATAVAYCKRGHGNAACNGR 184
PSGRQV G ++T T C+ H +AC+G+
Sbjct: 53 PSGRQVRGTQQTLTGGPGCRGSHDRSACSGK 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,780,409
Number of Sequences: 1657284
Number of extensions: 12985203
Number of successful extensions: 30235
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30224
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -