Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P22
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   109   5e-24
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   109   5e-24

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  109 bits (262), Expect = 5e-24
 Identities = 57/93 (61%), Positives = 69/93 (74%)
 Frame = +2

Query: 68  VQEARX*SPSGRQVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLL 247
           +Q+ R       QVFGRKKTATAVAYCKRG+G    NGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 248 GKEKFSMVDIRVTVKGWVVM*HKFTLSRQAISK 346
           GKEKF+ VDIRV V G   +   + + RQAISK
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAI-RQAISK 92



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 36/71 (50%), Positives = 46/71 (64%)
 Frame = +1

Query: 298 GGHVAQVYAIPTSYFKRL*SPSTRNM*TKPQRRKIKDILVQYDRSLLVG*PRVAASPKKX 477
           GGHVAQ+YAI  +  K L +   + +  +  +++IKDILVQYDR+LLVG PR    PKK 
Sbjct: 77  GGHVAQIYAIRQAISKALVAFYQKYV-DEASKKEIKDILVQYDRTLLVGDPR-RCEPKKF 134

Query: 478 GWSXXPRARYQ 510
           G     RARYQ
Sbjct: 135 G-GPGARARYQ 144



 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 26/43 (60%), Positives = 28/43 (65%)
 Frame = +3

Query: 345 KALIAFYQKYVDEASKKENQRHPSSIR*EFAGGLTPRRCEPKK 473
           KAL+AFYQKYVDEASKKE +            G  PRRCEPKK
Sbjct: 92  KALVAFYQKYVDEASKKEIKDILVQYDRTLLVG-DPRRCEPKK 133


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  109 bits (262), Expect = 5e-24
 Identities = 57/93 (61%), Positives = 69/93 (74%)
 Frame = +2

Query: 68  VQEARX*SPSGRQVFGRKKTATAVAYCKRGHGNAACNGRPLDLVEPRLLQYKLQEPILLL 247
           +Q+ R       QVFGRKKTATAVAYCKRG+G    NGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 248 GKEKFSMVDIRVTVKGWVVM*HKFTLSRQAISK 346
           GKEKF+ VDIRV V G   +   + + RQAISK
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAI-RQAISK 92



 Score = 59.3 bits (137), Expect = 7e-09
 Identities = 36/71 (50%), Positives = 46/71 (64%)
 Frame = +1

Query: 298 GGHVAQVYAIPTSYFKRL*SPSTRNM*TKPQRRKIKDILVQYDRSLLVG*PRVAASPKKX 477
           GGHVAQ+YAI  +  K L +   + +  +  +++IKDILVQYDR+LLVG PR    PKK 
Sbjct: 77  GGHVAQIYAIRQAISKALVAFYQKYV-DEASKKEIKDILVQYDRTLLVGDPR-RCEPKKF 134

Query: 478 GWSXXPRARYQ 510
           G     RARYQ
Sbjct: 135 G-GPGARARYQ 144



 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 26/43 (60%), Positives = 28/43 (65%)
 Frame = +3

Query: 345 KALIAFYQKYVDEASKKENQRHPSSIR*EFAGGLTPRRCEPKK 473
           KAL+AFYQKYVDEASKKE +            G  PRRCEPKK
Sbjct: 92  KALVAFYQKYVDEASKKEIKDILVQYDRTLLVG-DPRRCEPKK 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,706,472
Number of Sequences: 53049
Number of extensions: 614324
Number of successful extensions: 1575
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)