Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P21
         (938 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    27   0.21 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.9  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 415 CGKCTPAPENIYSNVSLKVVXDKLPQXXXAFKTKYDPQG 531
           C KC+   +   S+  ++ + D  P    A + KYDP G
Sbjct: 77  CSKCSEKQKE-GSDFIMRYLIDNKPDYWKALEAKYDPDG 114


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 421 KCTPAPENIYSNVSLKVVXDKLP 489
           KC P P  IYS VS  V  + LP
Sbjct: 36  KC-PKPAPIYSPVSKPVSFESLP 57


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 494 NXKPSKLNTIPKEKHSDAL*SAXR 565
           N K ++ N +P+EK  DAL  + R
Sbjct: 17  NLKNAEFNGLPEEKLLDALCQSFR 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,868
Number of Sequences: 336
Number of extensions: 2822
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26375415
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)