Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P21
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0185 + 1366715-1366882,1366985-1367039,1368563-1368753,136...    28   9.3  

>12_01_0185 +
           1366715-1366882,1366985-1367039,1368563-1368753,
           1369882-1369951,1370027-1370172,1370612-1370762,
           1371228-1371346,1371482-1371553,1372546-1372649,
           1373093-1373285,1373501-1373644,1373706-1373792,
           1373967-1374065
          Length = 532

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 345 LAERCFPGGISKKGHSLKAVAXSMWQMYSSPRKHLFKRFLES 470
           LAE  F  G+ K   +  A+  + WQ Y +P   +   F ES
Sbjct: 346 LAEAAFLIGLEKNSWNPDAIVFNSWQQYGTPSYWMQTYFRES 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,642,503
Number of Sequences: 37544
Number of extensions: 315085
Number of successful extensions: 543
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)