Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P21
         (938 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g18550.1 68414.m02314 kinesin motor protein-related contains ...    30   2.5  

>At1g18550.1 68414.m02314 kinesin motor protein-related contains
           similarity to kinesin-related protein GI:4493964 from
           [Plasmodium falciparum]
          Length = 799

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = -3

Query: 264 SNNPKNPSXFPEACMSLFNK*DQPSEPSAKTTKQRKKPLHSL 139
           +NN  N S  P +  SL       + PSA T +Q+KKP HSL
Sbjct: 539 ANNNNNISLTPPSISSLM------TPPSALTAQQKKKPRHSL 574


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,161,187
Number of Sequences: 28952
Number of extensions: 257665
Number of successful extensions: 475
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2246578488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)