Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P19
         (908 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    28   0.12 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.15 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.15 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    27   0.27 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   7.6  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 13/41 (31%), Positives = 13/41 (31%)
 Frame = +1

Query: 760 PXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPPPXPXP 882
           P  P   PP    P P    P         P  PP P P P
Sbjct: 65  PIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105



 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 643 PXPPPXPXPPP 675
           P  PP P PPP
Sbjct: 95  PTTPPTPSPPP 105


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +3

Query: 786 PXXXPPPXPXXPPHPPXTXXXPPXPPPXPXXPPP 887
           P    PP P   PHPP     P    P P    P
Sbjct: 226 PTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELP 259



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/48 (27%), Positives = 13/48 (27%)
 Frame = +1

Query: 754 PXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPPPXPXPPPXTP 897
           P P      P      P     P TP         PPP     PP  P
Sbjct: 702 PSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNP 749


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +3

Query: 786 PXXXPPPXPXXPPHPPXTXXXPPXPPPXPXXPPP 887
           P    PP P   PHPP     P    P P    P
Sbjct: 118 PTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELP 151



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/48 (27%), Positives = 13/48 (27%)
 Frame = +1

Query: 754 PXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPPPXPXPPPXTP 897
           P P      P      P     P TP         PPP     PP  P
Sbjct: 594 PSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNP 641


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 8/43 (18%)
 Frame = +2

Query: 683 PHXXPPPXXXPPXPSXXP--------PPXPPXPPPXXPPXPPP 787
           P   P P    P P+  P        PP P  PP   PP  PP
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 25.0 bits (52), Expect = 0.82
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 652 PPXPXPPPXPXPXPXPP 702
           PP P  PP P P   PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/43 (30%), Positives = 13/43 (30%)
 Frame = +3

Query: 771 PPXPPPXXXPPPXPXXPPHPPXTXXXPPXPPPXPXXPPPXHXP 899
           P   P      P P  PP        PP P   P   PP   P
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/48 (29%), Positives = 14/48 (29%)
 Frame = +1

Query: 661 PXPPPXPXPXPXPPPXXPXXXLXXPXPXXPXPXPXXPPPXPPPXXXPP 804
           P   P P      P   P   L    P  P   P   PP  PP    P
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 652 PPXPXPPPXPXP 687
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 670 PPXPXPXPXPPP 705
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/34 (29%), Positives = 11/34 (32%)
 Frame = +1

Query: 775 PXPPPXXXPPPXXXXPPTPPXXXPXPPXPPPPXP 876
           P P     P P    PP+ P      P    P P
Sbjct: 400 PEPTISTTPRPEWARPPSTPSADGSKPVQTTPKP 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.158    0.608 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,290
Number of Sequences: 336
Number of extensions: 7021
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)