BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P19
(908 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 34 0.002
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 27 0.24
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 0.32
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.3
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 2.9
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.9
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 8.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 8.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 8.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 8.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 8.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 8.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 8.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 8.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 8.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 8.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 8.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.9
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 683 PHXXPPPXXXPPXPSXXPPPXP-PXPPPXXPPXPPP 787
P P P P P PP P PPP PP PP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 33.9 bits (74), Expect = 0.002
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +2
Query: 671 PPXXPHXXP--PPXXXPPXPSXXPPPX-PPXPPPXXPP 775
P PH P P PP PS PPP PP PP P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 29.1 bits (62), Expect = 0.058
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 754 PXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPPPXPXPPP 888
P P P P P P P P P P PP P P
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 27.5 bits (58), Expect = 0.18
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +2
Query: 650 PXXXPXRPPXXPHXXPPPXXXPPXPSXXPPPXPPXPPP 763
P P + P P PP P PP PP P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 25.8 bits (54), Expect = 0.54
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +1
Query: 748 PXPXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXP 861
P P P P P P P PP P P P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 25.0 bits (52), Expect = 0.95
Identities = 13/44 (29%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Frame = +2
Query: 668 RPPXXPHXXPPPXXXPPXPSXXPPPXPPXPPPXXPPXPP--PPP 793
+ P P P P P P P PP P PPP
Sbjct: 5 KQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPP 48
Score = 25.0 bits (52), Expect = 0.95
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 759 PPXXPPXPPPXXXPPPXPXXPPHPPXTXXXPPXPPPXPXXPPPXHXP 899
P P P P P PP PP P P PP P
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPP--PGGPPGAPPSQNP 60
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Frame = +3
Query: 717 PXP-PXXXPPXPPXXPPXXPPXPPPXXXPPPXP 812
P P P P P P P PP PP P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Frame = +3
Query: 723 PPXXXPPXP-PXXPPXXPPXPPPXXXP 800
P PP P PP PP PP P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 24.2 bits (50), Expect = 1.7
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +3
Query: 804 PXPXXPPHPPXTXXXPPXPPPXPXXPPPXHXPXXP 908
P P PH PP PPP P P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
Score = 23.8 bits (49), Expect = 2.2
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 726 PXXXPPXPPXXPPXXPPXPPPXXXPPPXPXXPPHPPXTXXXPPXPPP 866
P P P P P P PP P P P PP P
Sbjct: 16 PSSGAPGPQPSPHQSP--QAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 22.6 bits (46), Expect = 5.1
Identities = 12/45 (26%), Positives = 12/45 (26%)
Frame = +1
Query: 733 PXPXXPXPXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPP 867
P P P P P PP P P PP P
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/36 (30%), Positives = 11/36 (30%)
Frame = +2
Query: 476 PXPXXLXXXPPPXPPPXXPPPXXXXPPPPPXXGXDP 583
P P P P PP PPP G P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +2
Query: 467 PPXPXPXXLXXXPPPXPPPXXPP 535
P P PPP PP PP
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPP 56
Score = 21.8 bits (44), Expect = 8.9
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 640 PPXPPPXPXPPPXPXPXPXPPPXXP 714
P P P P P PPP P
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGP 51
Score = 21.8 bits (44), Expect = 8.9
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 640 PPXPPPXPXPPPXPXPXPXPPPXXP 714
P P P P P P PP P
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPGAP 55
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 27.1 bits (57), Expect = 0.24
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 704 GGGXGXGXGXGGGXGXGGGXG 642
G G G G G GG G GG G
Sbjct: 79 GRGKGRGHGKGGSRGRGGNRG 99
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 826 TPPXXXPXPPXPPPPXPXP 882
TPP P PP PPP P
Sbjct: 337 TPPK--PAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 506 PPXPPPXXPPPXXXXP 553
PP P P PPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect(2) = 0.32
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 640 PPXPPPXPXPPPXPXP 687
PP P P P PP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 652 PPXPXPPPXPXPXPXP 699
PP P PPP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 850 PPXPPPPXPXPPPXTP 897
PP P PP P P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.6 bits (46), Expect = 5.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 734 PPPXPPXPPP 763
P P PP PPP
Sbjct: 339 PKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 530 PPPXXXXPPPPPXXGXD 580
PP PPPP G D
Sbjct: 338 PPKPAPPPPPPSSSGPD 354
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 670 PPXPXPXPXPP 702
PP P P P PP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 755 PPPXXPPXPPP 787
PP PP PPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 758 PPXXPPXPPPP 790
PP P PPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 761 PXXPPXPPPPP 793
P P PPPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 21.8 bits (44), Expect = 8.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 801 PPXPXXPPHPP 833
PP P PP PP
Sbjct: 338 PPKPAPPPPPP 348
Score = 21.4 bits (43), Expect(2) = 0.32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 490 SSXPPPPXPPP 522
S PP P PPP
Sbjct: 335 SDTPPKPAPPP 345
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 792 GGGGGXGGXXGGGXGGXGGGXXEGXGG 712
GGGG G GG GG GG G
Sbjct: 1705 GGGGSLAGL--GGLGGLGGAAEASAAG 1729
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 792 GGGGGXGGXXGGGXGGXGGGXXEGXGG 712
GGGG G GG GG GG G
Sbjct: 1701 GGGGSLAGL--GGLGGLGGAAEASAAG 1725
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.4 bits (48), Expect = 2.9
Identities = 17/71 (23%), Positives = 17/71 (23%)
Frame = +1
Query: 670 PPXPXPXPXPPPXXPXXXLXXPXPXXPXPXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPX 849
P P P P P L P P P P P P P
Sbjct: 70 PGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 129
Query: 850 PPXPPPPXPXP 882
P P P P
Sbjct: 130 VYIPQPRPPHP 140
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -1
Query: 854 GGXGXCXGGVGGXXXXGGGXXXGGGXGGGXXGXG 753
GG G G GG G GGG G G
Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGGGGLG 53
Score = 22.6 bits (46), Expect = 5.1
Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
Frame = -3
Query: 783 GGXGGXXGGGX--GGXGGGXXEGXGGXXXGGG 694
GG G GG G GG G GGG
Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 499 PPPPXPPP 522
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 770 PPXPPPPP 793
PP PPPPP
Sbjct: 1355 PPPPPPPP 1362
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 375 PFPPRFIPPDMYRLRPPP 392
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 360 PFPPRFIPPDMYRLRPPP 377
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 509 PXPPPXXPPPXXXXPPPP 562
P PP PP PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.158 0.608
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,871
Number of Sequences: 438
Number of extensions: 21396
Number of successful extensions: 96
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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