BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_P19 (908 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 34 0.002 DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 27 0.24 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 0.32 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.3 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.3 X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 2.9 DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.9 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.9 DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 8.9 DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 8.9 DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 8.9 DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 8.9 DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 8.9 DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 8.9 DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 8.9 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.9 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.9 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.9 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 8.9 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 8.9 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 8.9 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.9 AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 8.9 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.9 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 33.9 bits (74), Expect = 0.002 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Frame = +2 Query: 683 PHXXPPPXXXPPXPSXXPPPXP-PXPPPXXPPXPPP 787 P P P P P PP P PPP PP PP Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56 Score = 33.9 bits (74), Expect = 0.002 Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 3/38 (7%) Frame = +2 Query: 671 PPXXPHXXP--PPXXXPPXPSXXPPPX-PPXPPPXXPP 775 P PH P P PP PS PPP PP PP P Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 29.1 bits (62), Expect = 0.058 Identities = 14/45 (31%), Positives = 14/45 (31%) Frame = +1 Query: 754 PXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPPPXPXPPP 888 P P P P P P P P P P PP P P Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 27.5 bits (58), Expect = 0.18 Identities = 12/38 (31%), Positives = 13/38 (34%) Frame = +2 Query: 650 PXXXPXRPPXXPHXXPPPXXXPPXPSXXPPPXPPXPPP 763 P P + P P PP P PP PP P Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 25.8 bits (54), Expect = 0.54 Identities = 12/38 (31%), Positives = 12/38 (31%) Frame = +1 Query: 748 PXPXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXP 861 P P P P P P P PP P P P Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 25.0 bits (52), Expect = 0.95 Identities = 13/44 (29%), Positives = 14/44 (31%), Gaps = 2/44 (4%) Frame = +2 Query: 668 RPPXXPHXXPPPXXXPPXPSXXPPPXPPXPPPXXPPXPP--PPP 793 + P P P P P P P PP P PPP Sbjct: 5 KQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPP 48 Score = 25.0 bits (52), Expect = 0.95 Identities = 14/47 (29%), Positives = 14/47 (29%) Frame = +3 Query: 759 PPXXPPXPPPXXXPPPXPXXPPHPPXTXXXPPXPPPXPXXPPPXHXP 899 P P P P P PP PP P P PP P Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPP--PGGPPGAPPSQNP 60 Score = 24.6 bits (51), Expect = 1.3 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%) Frame = +3 Query: 717 PXP-PXXXPPXPPXXPPXXPPXPPPXXXPPPXP 812 P P P P P P P PP PP P Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55 Score = 24.6 bits (51), Expect = 1.3 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 1/27 (3%) Frame = +3 Query: 723 PPXXXPPXP-PXXPPXXPPXPPPXXXP 800 P PP P PP PP PP P Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 24.2 bits (50), Expect = 1.7 Identities = 11/35 (31%), Positives = 11/35 (31%) Frame = +3 Query: 804 PXPXXPPHPPXTXXXPPXPPPXPXXPPPXHXPXXP 908 P P PH PP PPP P P Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55 Score = 23.8 bits (49), Expect = 2.2 Identities = 14/47 (29%), Positives = 14/47 (29%) Frame = +3 Query: 726 PXXXPPXPPXXPPXXPPXPPPXXXPPPXPXXPPHPPXTXXXPPXPPP 866 P P P P P P PP P P P PP P Sbjct: 16 PSSGAPGPQPSPHQSP--QAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 22.6 bits (46), Expect = 5.1 Identities = 12/45 (26%), Positives = 12/45 (26%) Frame = +1 Query: 733 PXPXXPXPXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPXPPXPPP 867 P P P P P PP P P PP P Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60 Score = 22.6 bits (46), Expect = 5.1 Identities = 11/36 (30%), Positives = 11/36 (30%) Frame = +2 Query: 476 PXPXXLXXXPPPXPPPXXPPPXXXXPPPPPXXGXDP 583 P P P P PP PPP G P Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56 Score = 22.2 bits (45), Expect = 6.7 Identities = 9/23 (39%), Positives = 9/23 (39%) Frame = +2 Query: 467 PPXPXPXXLXXXPPPXPPPXXPP 535 P P PPP PP PP Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPP 56 Score = 21.8 bits (44), Expect = 8.9 Identities = 9/25 (36%), Positives = 9/25 (36%) Frame = +1 Query: 640 PPXPPPXPXPPPXPXPXPXPPPXXP 714 P P P P P PPP P Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGP 51 Score = 21.8 bits (44), Expect = 8.9 Identities = 9/25 (36%), Positives = 9/25 (36%) Frame = +1 Query: 640 PPXPPPXPXPPPXPXPXPXPPPXXP 714 P P P P P P PP P Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPGAP 55 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 27.1 bits (57), Expect = 0.24 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = -1 Query: 704 GGGXGXGXGXGGGXGXGGGXG 642 G G G G G GG G GG G Sbjct: 79 GRGKGRGHGKGGSRGRGGNRG 99 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 23.4 bits (48), Expect = 2.9 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +1 Query: 826 TPPXXXPXPPXPPPPXPXP 882 TPP P PP PPP P Sbjct: 337 TPPK--PAPPPPPPSSSGP 353 Score = 23.4 bits (48), Expect = 2.9 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = +2 Query: 506 PPXPPPXXPPPXXXXP 553 PP P P PPP P Sbjct: 338 PPKPAPPPPPPSSSGP 353 Score = 23.4 bits (48), Expect(2) = 0.32 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = +1 Query: 640 PPXPPPXPXPPPXPXP 687 PP P P P PP P Sbjct: 338 PPKPAPPPPPPSSSGP 353 Score = 23.4 bits (48), Expect = 2.9 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = +1 Query: 652 PPXPXPPPXPXPXPXP 699 PP P PPP P P Sbjct: 338 PPKPAPPPPPPSSSGP 353 Score = 23.0 bits (47), Expect = 3.8 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = +1 Query: 850 PPXPPPPXPXPPPXTP 897 PP P PP P P P Sbjct: 338 PPKPAPPPPPPSSSGP 353 Score = 22.6 bits (46), Expect = 5.1 Identities = 7/10 (70%), Positives = 7/10 (70%) Frame = +2 Query: 734 PPPXPPXPPP 763 P P PP PPP Sbjct: 339 PKPAPPPPPP 348 Score = 22.2 bits (45), Expect = 6.7 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 530 PPPXXXXPPPPPXXGXD 580 PP PPPP G D Sbjct: 338 PPKPAPPPPPPSSSGPD 354 Score = 22.2 bits (45), Expect = 6.7 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +1 Query: 670 PPXPXPXPXPP 702 PP P P P PP Sbjct: 338 PPKPAPPPPPP 348 Score = 22.2 bits (45), Expect = 6.7 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +2 Query: 755 PPPXXPPXPPP 787 PP PP PPP Sbjct: 338 PPKPAPPPPPP 348 Score = 22.2 bits (45), Expect = 6.7 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +2 Query: 758 PPXXPPXPPPP 790 PP P PPPP Sbjct: 338 PPKPAPPPPPP 348 Score = 22.2 bits (45), Expect = 6.7 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +2 Query: 761 PXXPPXPPPPP 793 P P PPPPP Sbjct: 338 PPKPAPPPPPP 348 Score = 21.8 bits (44), Expect = 8.9 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +3 Query: 801 PPXPXXPPHPP 833 PP P PP PP Sbjct: 338 PPKPAPPPPPP 348 Score = 21.4 bits (43), Expect(2) = 0.32 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +1 Query: 490 SSXPPPPXPPP 522 S PP P PPP Sbjct: 335 SDTPPKPAPPP 345 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 24.6 bits (51), Expect = 1.3 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = -3 Query: 792 GGGGGXGGXXGGGXGGXGGGXXEGXGG 712 GGGG G GG GG GG G Sbjct: 1705 GGGGSLAGL--GGLGGLGGAAEASAAG 1729 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 24.6 bits (51), Expect = 1.3 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = -3 Query: 792 GGGGGXGGXXGGGXGGXGGGXXEGXGG 712 GGGG G GG GG GG G Sbjct: 1701 GGGGSLAGL--GGLGGLGGAAEASAAG 1725 >X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor protein. Length = 168 Score = 23.4 bits (48), Expect = 2.9 Identities = 17/71 (23%), Positives = 17/71 (23%) Frame = +1 Query: 670 PPXPXPXPXPPPXXPXXXLXXPXPXXPXPXPXXPPPXPPPXXXPPPXXXXPPTPPXXXPX 849 P P P P P L P P P P P P P Sbjct: 70 PGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 129 Query: 850 PPXPPPPXPXP 882 P P P P Sbjct: 130 VYIPQPRPPHP 140 >DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein STG-1 protein. Length = 397 Score = 23.4 bits (48), Expect = 2.9 Identities = 12/34 (35%), Positives = 12/34 (35%) Frame = -1 Query: 854 GGXGXCXGGVGGXXXXGGGXXXGGGXGGGXXGXG 753 GG G G GG G GGG G G Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGGGGLG 53 Score = 22.6 bits (46), Expect = 5.1 Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 2/32 (6%) Frame = -3 Query: 783 GGXGGXXGGGX--GGXGGGXXEGXGGXXXGGG 694 GG G GG G GG G GGG Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 23.4 bits (48), Expect = 2.9 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = +1 Query: 499 PPPPXPPP 522 PPPP PPP Sbjct: 1355 PPPPPPPP 1362 Score = 23.4 bits (48), Expect = 2.9 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = +2 Query: 770 PPXPPPPP 793 PP PPPPP Sbjct: 1355 PPPPPPPP 1362 >DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex determiner protein. Length = 152 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 127 PFPPRFIPPDMYRLRPPP 144 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 375 PFPPRFIPPDMYRLRPPP 392 >AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex determiner protein. Length = 385 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 360 PFPPRFIPPDMYRLRPPP 377 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 21.8 bits (44), Expect = 8.9 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +2 Query: 509 PXPPPXXPPPXXXXPPPP 562 P PP PP PPP Sbjct: 376 PFPPRFIPPDMYRLRPPP 393 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.316 0.158 0.608 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 269,871 Number of Sequences: 438 Number of extensions: 21396 Number of successful extensions: 96 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 78 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 29509116 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.8 bits)
- SilkBase 1999-2023 -