Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P17
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   210   8e-55
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   198   5e-51
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   198   6e-51
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   195   3e-50
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426...    28   8.6  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  210 bits (514), Expect = 8e-55
 Identities = 93/151 (61%), Positives = 116/151 (76%)
 Frame = +1

Query: 112 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 291
           A + ERTFI +KPDGVQRGL+  I+ RFE+KGFKLV +K V PS+E  Q+HY DL  RPF
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 292 FPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 471
           F GL  ++SSGPV+ MVWEG  V+K GR+++GAT+P  S+PGTIRGDL + VGRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161

Query: 472 DSVESAKKEIGLWFTDKEVVGWTPANENWVY 564
           D  E+AK EIGLWF  +E+V +T   E W+Y
Sbjct: 162 DGPETAKAEIGLWFEPRELVSYTSNEEKWIY 192


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  198 bits (483), Expect = 5e-51
 Identities = 86/148 (58%), Positives = 113/148 (76%)
 Frame = +1

Query: 124 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 303
           E+TFIM+KPDGVQRGL+G +I RFEKKGF L  +K +   +   ++HY+DL+S+PFF GL
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63

Query: 304 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 483
           V+Y+ SGPVV MVWEG  VV TGR+++GATNP  ++PGTIRGD  + +GRN+IHGSDSVE
Sbjct: 64  VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123

Query: 484 SAKKEIGLWFTDKEVVGWTPANENWVYE 567
           +A+KEI LWF +  +  W      W+YE
Sbjct: 124 NARKEIALWFPE-GIAEWRSNQHPWIYE 150


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  198 bits (482), Expect = 6e-51
 Identities = 88/148 (59%), Positives = 113/148 (76%)
 Frame = +1

Query: 124 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 303
           E++FIM+KPDGVQRGL+G II RFEKKGF L G+KF+       QQHY+DL+ +PFFPGL
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61

Query: 304 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 483
           V+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D  ++VGRN+IHGSDSV+
Sbjct: 62  VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121

Query: 484 SAKKEIGLWFTDKEVVGWTPANENWVYE 567
           + KKEI LWF +  +  W      W+YE
Sbjct: 122 NGKKEIALWFPE-GLAEWRSNLHPWIYE 148


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  195 bits (476), Expect = 3e-50
 Identities = 84/148 (56%), Positives = 111/148 (75%)
 Frame = +1

Query: 124 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 303
           E+++IM+KPDGVQRGLVG II RFEKKGF L GLK     ++L Q+HY DL  +PFFPGL
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62

Query: 304 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 483
           ++Y++SGPVV M WEG  VV + R+++GATNP  ++PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63  IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122

Query: 484 SAKKEIGLWFTDKEVVGWTPANENWVYE 567
           + K+EI LWF + E+  W      W+ E
Sbjct: 123 NGKREIALWFKEGELCEWESVLTPWLVE 150


>01_06_0319 -
           28441082-28441102,28441630-28441701,28442568-28442627,
           28442918-28443105,28444300-28444327,28444880-28444907,
           28444942-28445163,28445238-28445409,28446224-28447468,
           28447573-28447741,28447820-28448045,28449096-28449451,
           28449530-28449724,28450655-28450864,28451729-28452004
          Length = 1155

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 374 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRS--SSDGHTNFKPTSLKP 204
           RP       S+T  +  P+    +RPGK+G DA+S+     S  S    T  +P S KP
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESVPGTNGSDLSQTDDTEARPCSKKP 587


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,796,618
Number of Sequences: 37544
Number of extensions: 345058
Number of successful extensions: 876
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)