Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P15
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    34   0.002
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   1.7  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   6.9  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 318 HLMPPVIQLTSPLKNFSAKXPERPCKR*EAAFXHASRFEERYKSGKNKWFFR 473
           H+ P VI   +       K  + P KR    F    + +E  KSG+NKWFF+
Sbjct: 40  HVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQEGSKSGRNKWFFQ 91


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPLKNFSAKXPERP 389
           ST+ S   FR+ L  YN  +P    L SP    S+  P  P
Sbjct: 257 STEVSAPFFRQPLDLYNFRVPQHQVLQSPSSTSSSPEPRSP 297


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 143 GYRSQEXTTKVLPTSRTGMLSSLVSTGTPRE 235
           GY       +VLPT   G L  L+    P++
Sbjct: 19  GYLENIRDRRVLPTVEPGYLRPLIPATAPQK 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,174
Number of Sequences: 336
Number of extensions: 2572
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)