Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P15
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0470 - 10700092-10700505                                         62   7e-10
10_08_0951 - 21769342-21769752                                         59   5e-09
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733...    28   7.9  

>02_02_0470 - 10700092-10700505
          Length = 137

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = +3

Query: 99  G*VVLVLSGRYAGRKAIVVKXLRRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIXSTKR 278
           G  V++L GRYAGRKA++V+        +    C      + P   + K+   +  + K+
Sbjct: 8   GKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKK--TAKK 65

Query: 279 SR*AFRERL*TYNHLMPPVIQLTSPLKNFSAKXPERPCKR*E--AAFXHA-SRFEERYKS 449
           SR     +L  + H+MP    L    K+ ++  P+    R +  AA   A +R EER+K+
Sbjct: 66  SRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLEERFKT 125

Query: 450 GKNKWFF 470
           GKN+WFF
Sbjct: 126 GKNRWFF 132



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +1

Query: 157 RXYDEGTSDKPYGHAFVAGIDRYP 228
           R ++EGT D+PYGH  VAG+ +YP
Sbjct: 27  RVFEEGTRDRPYGHCLVAGLAKYP 50


>10_08_0951 - 21769342-21769752
          Length = 136

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = +3

Query: 99  G*VVLVLSGRYAGRKAIVVKXLRRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIXSTKR 278
           G  V++L GR+AGRKA++V+        +    C      + P   + K+   +  + K+
Sbjct: 8   GKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKK--TAKK 65

Query: 279 SR*AFRERL*TYNHLMPPVIQLTSPLKNFSAKXPERPCKR*E--AAFXHA-SRFEERYKS 449
           SR     +L  + HLMP    L   LK  +A  P+    R +  AA   A +R E+R+K+
Sbjct: 66  SRVKCFLKLVNFTHLMPTRYTLDVDLKEVAA-GPDALATRDKKVAACKSAKARLEDRFKT 124

Query: 450 GKNKWFF 470
           GKN+WFF
Sbjct: 125 GKNRWFF 131



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +1

Query: 157 RXYDEGTSDKPYGHAFVAGIDRYP 228
           R ++EGT D+PYGH  VAG+ +YP
Sbjct: 27  RVFEEGTRDRPYGHCLVAGLAKYP 50


>04_03_0927 +
           20871487-20871903,20872667-20872812,20873204-20873301,
           20873378-20873572,20873670-20873797,20873892-20874050,
           20875119-20875223,20875449-20875559,20875653-20875790,
           20875909-20876091,20876362-20876517,20876615-20876738,
           20876820-20877030,20877614-20877729,20877828-20878053,
           20878218-20878311,20879198-20879275,20879822-20879971,
           20880086-20880292,20880584-20880788,20880990-20881096
          Length = 1117

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 407 SFLPFAGSFRSFGAEIFQRRSQLYNGWHQ 321
           SFL FAG    FG E+ Q RS   N   Q
Sbjct: 757 SFLDFAGYLERFGGELAQNRSNKENNHTQ 785


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,142,058
Number of Sequences: 37544
Number of extensions: 284763
Number of successful extensions: 523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)