Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P15
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    27   0.70 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   3.7  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 218 TGTPRESAQRGWGKNXXHKEV 280
           T +PR++A++GW     HKE+
Sbjct: 213 TPSPRDNAKKGWKTTLYHKEL 233


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 404  FLPFAGSFRSFGAEIFQRRSQLYNG 330
            +LP+   FR FG ++  + S LY G
Sbjct: 2648 YLPYGQIFRRFGTDLDGQISYLYTG 2672


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 404  FLPFAGSFRSFGAEIFQRRSQLYNG 330
            +LP+   FR FG ++  + S LY G
Sbjct: 2658 YLPYGQIFRRFGTDLDGQISYLYTG 2682


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 437 LFKTTRVXKRSFLPFAGSFRSFGAEIFQRRSQLYN 333
           L +TT V  R F  F+ +  +FG  +F+R+ Q Y+
Sbjct: 28  LVRTTDV--RQFWAFSNNNDNFGVGLFKRQEQEYS 60


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 146 YRSQEXTTKVLPTSRTGML--SSLVSTGTPRESAQRGW 253
           ++     T   P SR  +   SS++S   PR+ + RGW
Sbjct: 163 FKGNRADTNRFPPSRPDVTFASSVISRLDPRDDSARGW 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,385
Number of Sequences: 2352
Number of extensions: 10378
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)