Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P15
(832 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 68 4e-11
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 68 4e-11
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 68 4e-11
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 68 4e-11
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 68 4e-11
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 68 4e-11
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 68 4e-11
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 68 4e-11
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 64 6e-10
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 37 0.078
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 68.1 bits (159), Expect = 4e-11
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +3
Query: 99 G*VVLVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIX 266
G VVLVL+GRY+GRKA++VK + R + A+ A R+ R+V K+
Sbjct: 8 GKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------ 61
Query: 267 STKRSR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEER 440
KRS+ ++ YNHLMP + PL K K R P + +A +FEER
Sbjct: 62 IAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEER 121
Query: 441 YKSGKNKWFFR 473
YK+GKNKWFF+
Sbjct: 122 YKTGKNKWFFQ 132
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 30 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 73
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 64.1 bits (149), Expect = 6e-10
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Frame = +3
Query: 111 LVLSGRYAGRKAIVVKXL----RRRYFRQAVRACFRRWYRQVPPGKVHKEDGXRIXSTKR 278
LVL+GRY+GRKA++VK + R + A+ A R+ R+V K+ KR
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKK------IAKR 69
Query: 279 SR*AFRERL*TYNHLMPPVIQLTSPL-KNFSAKXPER-PCKR*EAAFXHASRFEERYKSG 452
S+ ++ YNHLMP + PL K K R P + +A +FEERYK+G
Sbjct: 70 SKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTG 129
Query: 453 KNKWFFR 473
KNKWFF+
Sbjct: 130 KNKWFFQ 136
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 166 DEGTSDKPYGHAFVAGIDRYPPGKCTKRMGXE*XPQRGPDKPFVK 300
D+GTSD+PY HA VAGIDRY P K T MG + +R K FVK
Sbjct: 34 DDGTSDRPYSHALVAGIDRY-PRKVTAAMGKKKIAKRSKIKSFVK 77
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 37.1 bits (82), Expect = 0.078
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 426 RFEERYKSGKNKWFFR 473
+FEERYK+GKNKWFF+
Sbjct: 21 KFEERYKTGKNKWFFQ 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,421,171
Number of Sequences: 237096
Number of extensions: 1545508
Number of successful extensions: 2273
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2254
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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