Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P13
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.2
02_01_0712 + 5329016-5329744,5330477-5330521 30 2.9
07_03_0890 - 22332768-22333382 29 3.8
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.0
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 29 5.0
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 5.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.6
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 28 8.7
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 28 8.7
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 28 8.7
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 28 8.7
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 768 PPXPPPXNAXFXXLXXPXPXXPPXXPXXXPXXXXXXXTXXPP 893
PP PPP P P PP P P T PP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPP 133
>02_01_0712 + 5329016-5329744,5330477-5330521
Length = 257
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 174 ENGGDSPDGEVAPGVDPVKVVDEDHG 251
E GG+S GE A VDP+ VV E+ G
Sbjct: 188 EEGGESDRGEPAGAVDPLPVVVEEGG 213
>07_03_0890 - 22332768-22333382
Length = 204
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 741 PVXSXXSXTPPXPPPXNAXFXXLXXPXPXXPPXXPXXXP 857
P + PP PPP A P P PP P P
Sbjct: 79 PAEATPPPPPPPPPPERAVPEAADTPPPPPPPTAPTPTP 117
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +3
Query: 768 PPXPPPXNAXFXXL-XXPXPXXPPXXPXXXPXXXXXXXTXXPP 893
PP PPP A P P PP P P T PP
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPP 274
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 741 PVXSXXSXTPPXPPPXNAXFXXLXXPXPXXPPXXPXXXP 857
PV P PPP + L P P PP P P
Sbjct: 86 PVQGKGHPAPTMPPPSSGSGHTLPSPPPPLPPLLPPPQP 124
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 741 PVXSXXSXTPPXPPPXNAXFXXLXXPXPXXPPXXPXXXPXXXXXXXTXXPP 893
P + + TPP PPP P PP P P T PP
Sbjct: 63 PTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPP 113
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 768 PPXPPPXNAXFXXLXXPXPXXPPXXPXXXPXXXXXXXTXXPP 893
PP PPP + P P PP P P PP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPP 588
>09_01_0076 +
1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 84 QFPVLRIEIMKFTVAFALIAMFAIVAVNSQENGGDSPDGEVAPGVDPVKVVDEDHGVNXV 263
Q V IEI+K V L A AV ENG PG PV++ + +GV +
Sbjct: 133 QLRVSFIEILKEEVRDLLDP--ATAAVGKLENGNGHATKLSVPGKPPVQIREASNGVITL 190
Query: 264 DGERKLYI 287
G ++++
Sbjct: 191 AGSTEVHV 198
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 123 VAFALIAMFAIVAVNSQE--NGGDSPDGEVAPGVDPVKVVDEDHGVNXVD 266
+A A+I +VAV+ Q+ +G S +G+ V P+KV ++ GVN +D
Sbjct: 253 MAKAVIFPLPLVAVSYQQLIHGCSSANGDAL--VSPLKVWEQSFGVNIID 300
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 28.3 bits (60), Expect = 8.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 248 MIFIHNFHWINAGGDFAIG 192
++F+ NFHW N+ D+ +G
Sbjct: 747 LVFVFNFHWSNSYFDYRVG 765
>01_07_0016 - 40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 162 VNSQENGGDSPDGEVAPGVDPVKVVDEDHGVNXVDGERKLY 284
++S E G P G P +D V + HG+ ++ LY
Sbjct: 1092 IHSLERSGSLPGGAPLPNLDVVNSLARHHGIGQLETHGDLY 1132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,749,241
Number of Sequences: 37544
Number of extensions: 265532
Number of successful extensions: 736
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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