Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P12
         (1091 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   5.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   5.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   5.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   5.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   9.4  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
          protein 17 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 51 KGKCTREGEARK 16
          KGKCT EGE  K
Sbjct: 49 KGKCTPEGEELK 60


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
          protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 51 KGKCTREGEARK 16
          KGKCT EGE  K
Sbjct: 50 KGKCTPEGEELK 61


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
          protein 14 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 51 KGKCTREGEARK 16
          KGKCT EGE  K
Sbjct: 50 KGKCTPEGEELK 61


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
          protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 51 KGKCTREGEARK 16
          KGKCT EGE  K
Sbjct: 50 KGKCTPEGEELK 61


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 51 KGKCTREGEARK 16
          KGKCT+E E  K
Sbjct: 48 KGKCTKEAEKLK 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,797
Number of Sequences: 336
Number of extensions: 1480
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 31444585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)