Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P11
         (897 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   171   3e-44
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   7.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  171 bits (415), Expect = 3e-44
 Identities = 79/116 (68%), Positives = 97/116 (83%)
 Frame = +1

Query: 76  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 255
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 256 PKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRDI 423
           PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS ++
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNV 120



 Score =  113 bits (271), Expect = 9e-27
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = +3

Query: 468 AEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPEPYL 641
           AE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF SVY KLTGR+VTFEFPE YL
Sbjct: 135 AEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192



 Score = 31.5 bits (68), Expect = 0.036
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +2

Query: 422 LTSVYDAILEDLVFP 466
           +T+VYDAILEDLVFP
Sbjct: 120 VTAVYDAILEDLVFP 134


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 658 VIG*VYK*GSGNSKVTSRPVSFXYTDWKV 572
           VI  V K G G++  + RP+S   TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,035
Number of Sequences: 2352
Number of extensions: 12420
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)