Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P11
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    26   0.54 
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   5.0  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   8.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 109 DSFETSISQALVELETNSDLKAQLRE 186
           ++  T++S AL EL  N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -1

Query: 135 LRDRGLEGIRLSTARFDDLRTHLDNFTGGKEQILRIPYSESV 10
           L D+G EGI+++      ++  +     GK  I  +     +
Sbjct: 102 LSDKGPEGIQINATELQKIKLEIHRDLPGKSTITTVEVKRDI 143


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 95  LALMIFVLILTT-LREGKSKS*EFP 24
           LAL +F LILT  LR+ +  S E P
Sbjct: 323 LALSVFALILTALLRKMQEMSIEVP 347


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 622 SKVTSRPVSFXYTDWK 575
           S++    ++F YTDW+
Sbjct: 420 SQIEREAITFQYTDWE 435


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 622 SKVTSRPVSFXYTDWK 575
           S++    ++F YTDW+
Sbjct: 420 SQIEREAITFQYTDWE 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,110
Number of Sequences: 438
Number of extensions: 3407
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)