Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P10
(876 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 79 1e-13
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 73 1e-11
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 62 2e-08
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 59 2e-07
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 58 2e-07
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 58 3e-07
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 56 1e-06
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 56 1e-06
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 56 1e-06
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 54 6e-06
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 54 6e-06
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 53 8e-06
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 51 4e-05
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 50 6e-05
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 50 6e-05
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 47 7e-04
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 46 0.002
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 44 0.004
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 44 0.004
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 43 0.012
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 43 0.012
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 42 0.016
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 41 0.036
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 37 0.58
UniRef50_Q9UB95 Cluster: Lipoprotein receptor precursor; n=5; Ca... 36 1.8
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 35 2.4
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 35 2.4
UniRef50_UPI0001553850 Cluster: PREDICTED: hypothetical protein;... 34 4.1
UniRef50_Q0V612 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 4.1
UniRef50_O75093 Cluster: Slit homolog 1 protein precursor; n=144... 33 7.2
UniRef50_UPI0000E47CE8 Cluster: PREDICTED: similar to breast can... 33 9.5
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 79.0 bits (186), Expect = 1e-13
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 110 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 15 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 72.9 bits (171), Expect = 1e-11
Identities = 41/89 (46%), Positives = 54/89 (60%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+WFYVRCAAILRH+YIR + C + + L S+ RKA+Q +EA
Sbjct: 51 DWFYVRCAAILRHLYIRPTGLTGLCKAFSRKKRNGVKPSHRSLA--HGSVIRKAIQQMEA 108
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
L L +K + GGR LT+ GRRDLDR+A Q+
Sbjct: 109 LGLCQKREGGGRSLTSAGRRDLDRLAYQI 137
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE--LVLCA 247
VK +A L KTGKV++P+ D+VK + +LAPY+P+ V CA
Sbjct: 15 VKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCA 58
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVW-SQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLE 407
+W+YVR AAI RHIY+R V + C ++ + + S+ RK +QSLE
Sbjct: 51 DWYYVRAAAIARHIYLRKQVGVGRLCK--VYGGSVNRGMRPSHHRDGSGSVQRKVVQSLE 108
Query: 408 ALKLVEKVQDGGRILTTQGRRDLDRIA 488
+ ++EK +GGR ++ QG+RDLDRIA
Sbjct: 109 KIGVLEKSDNGGRRISQQGQRDLDRIA 135
Score = 41.9 bits (94), Expect = 0.021
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
+ AA L ++GK+ P+ +D+VK KELAPYDP+
Sbjct: 15 ITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPD 51
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 58.8 bits (136), Expect = 2e-07
Identities = 29/89 (32%), Positives = 50/89 (56%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W++ RCA+I+R IY+ P+ + +D + Y + +I R A+ LE
Sbjct: 48 DWWHTRCASIMRKIYLHGPIGINELRKDYGGGKP-SGYGAAHHKDAGGAIIRNAIHGLEK 106
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
L +EKV+ GRI++ QG + LDR+A ++
Sbjct: 107 LGYLEKVEKKGRIVSKQGMQKLDRLATEI 135
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+YVR AA+LR +YI PV + S F +G +I R+ALQ LE
Sbjct: 49 DWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRG-SGAIIRRALQQLEE 107
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVR 500
L+++ ++ GR++T +GR LD+ AA+V+
Sbjct: 108 SGLIKR-EENGRVITPEGRSFLDKAAAEVK 136
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/95 (35%), Positives = 52/95 (54%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+Y R A+ILR +YI PV + + F + SI RKALQ LEA
Sbjct: 49 DWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAG-GSIIRKALQQLEA 107
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
+EKV GR++T +GR LD+IA +++ + ++
Sbjct: 108 AGFIEKVPGKGRVVTPKGRSFLDKIATELKKELEE 142
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +3
Query: 375 SIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
S A + LQ+LE LK+VEK QDGGR L QG+RDLDRIA QV K+
Sbjct: 221 SAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRIARQVAAANKK 267
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 104 LXKXXXVKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
L + V+ +AA L K+GK+KVPE +D VK A+ KELAPY+
Sbjct: 154 LYQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYE 194
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+Y R A+I R IY+R + + Q S F + +I+R LQ L+
Sbjct: 74 DWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKS-SGAISRNILQQLQK 132
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
+ +++ GGR++T+QGRRDLD++A +V
Sbjct: 133 MGIIDVDPKGGRLITSQGRRDLDQVAGRV 161
Score = 39.5 bits (88), Expect = 0.11
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 158 KVKVPEHMDLVKXARFKELAPYDPE 232
++++PE +D+VK ARFKEL PYDP+
Sbjct: 50 QMELPEWVDIVKTARFKELPPYDPD 74
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+Y R A+I R IY+R + + Q S F + +I+R LQ L+
Sbjct: 54 DWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKS-SGAISRNILQQLQK 112
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
+ +++ GGR++T+QGRRDLD++A +V
Sbjct: 113 MGIIDVDPKGGRLITSQGRRDLDQVAGRV 141
Score = 54.4 bits (125), Expect = 4e-06
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
VK +AHL ++GK+++PE +D+VK ARFKEL PYDP+
Sbjct: 18 VKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPD 54
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 53.6 bits (123), Expect = 6e-06
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+Y+R A+I R +Y+R + A + F Q + R LQ LE
Sbjct: 60 DWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHF-QKASGGLIRHILQQLEE 118
Query: 411 LKLVEK----VQDGGRILTTQGRRDLDRIAAQV 497
+K+VEK V GGR +T+ G++DLDRIA QV
Sbjct: 119 MKVVEKCPEGVNKGGRKITSHGQQDLDRIAGQV 151
Score = 43.2 bits (97), Expect = 0.009
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
+K A HL ++GK+++P D+VK A FKE +P DP+
Sbjct: 24 IKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPD 60
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 53.6 bits (123), Expect = 6e-06
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+YVR A++ R +YIRSP + ++ + T S+ RKALQ+LEA
Sbjct: 52 DWYYVRTASVARRLYIRSPT-GVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEA 110
Query: 411 LKLVEKVQDG-GRILT 455
+K VEK DG GRILT
Sbjct: 111 IKWVEKHPDGNGRILT 126
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
V+ +A L K+GKVKVPE DLVK KELAP D +
Sbjct: 16 VRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSD 52
Score = 35.1 bits (77), Expect = 2.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 292 GVKTVTKIFGGRKRNGVTPSHFCRVIXAVLHARL 393
GV + +++G KR GVTP+HF + +V+ L
Sbjct: 72 GVGALRRVYGSNKRRGVTPNHFAKASGSVIRKAL 105
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 53.2 bits (122), Expect = 8e-06
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+YVR AA+ RHIY+R V + + S + S+ RK +QSLE
Sbjct: 125 DWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDA-SGSVDRKIIQSLEK 183
Query: 411 LKLVEKVQD-GGRILTTQGRRDLDRIA 488
+ ++E ++ GGR +T G+RDLDRIA
Sbjct: 184 IGVLEYDEEKGGRRITQAGQRDLDRIA 210
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+Y+R A+I R +YI PV + + S F +G +I R AL LE
Sbjct: 47 DWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKG-SGAIVRNALHQLEQ 105
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVR 500
L V+K ++ GR++T GR LD++A +++
Sbjct: 106 LGFVKKTRE-GRVVTPMGRSFLDKVATELK 134
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 50.4 bits (115), Expect = 6e-05
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+Y+R A+ILR +Y+ PV Q + F +G +I RK LQ LE
Sbjct: 49 DWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKG-SGAIIRKILQQLEE 107
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
LVEK ++ GR++T +GR +D A ++
Sbjct: 108 AGLVEKTEE-GRVVTPEGRSLVDSTAHEI 135
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = +3
Query: 234 WFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEAL 413
W++ RCA+++R IY+ P+ + + Y + +I R A+ LE L
Sbjct: 43 WWHTRCASLMRKIYLHGPIGINGLRSEYGGGKP-RGYGAANHRKAGGAIIRNAVHGLEKL 101
Query: 414 KLVEKVQDGGRILTTQGRRDLDRIAAQV 497
+EK+ GRI++ QG + LDR++ ++
Sbjct: 102 GYIEKLDKKGRIVSRQGMQKLDRLSTEI 129
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 46.8 bits (106), Expect = 7e-04
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W Y+R AAI R +Y+ + + + + Q Y + + R LQ LE
Sbjct: 52 DWIYIRAAAIARKVYLNNGIGVMALRR-AYGDQYNKHYYPSHRTLGSGKVNRYILQQLEK 110
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQ 494
+ +V K+Q G R LT +GR+D+D+IA++
Sbjct: 111 MGIVGKIQSG-RSLTKEGRKDMDKIASK 137
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPELV 238
+K A HL K+GK+++PE +D VK KELAP +P+ +
Sbjct: 16 IKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWI 54
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 45.6 bits (103), Expect = 0.002
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W Y+R AA+ R +Y++ P + ++ + Q I R AL+SLE
Sbjct: 55 DWVYIRTAALARKVYLK-PHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLED 113
Query: 411 LKLVEKVQDG-----GRILTTQGRRDLDRIAAQVRLKAKQ 515
LK++ K ++ R++T +G +L+RIA Q+ +K +Q
Sbjct: 114 LKIIRKDKNSATKKFSRVITKEGMTELNRIATQIAIKQRQ 153
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
V T A+HL + G +++P +D +K A +ELAPYDP+
Sbjct: 22 VNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPD 58
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W Y+R A+I R +YIR + + + + ++ + + R +LQ LE
Sbjct: 58 DWLYIRIASIARKLYIRGGIGTGE-FRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEK 116
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQ 494
L + EK + GGR +T++G+ ++D A+Q
Sbjct: 117 LGVAEKDERGGRRITSKGQSEMDTQASQ 144
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 44.4 bits (100), Expect = 0.004
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W++ R AA+LR +Y+ P+ + ++ S F +G S+ RKALQ LEA
Sbjct: 49 DWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKG-SGSVLRKALQQLEA 107
Query: 411 LKLVEKVQD-GGRILTTQGRRDLDRIAAQV 497
L+ V D GR ++ G LD +A +V
Sbjct: 108 AGLI--VHDKTGRKVSPAGMAFLDSVAKEV 135
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 42.7 bits (96), Expect = 0.012
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +3
Query: 201 ASKSWLRMTLNWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSI 380
+SK +W Y+R A+ILRH+Y+R P + + I
Sbjct: 54 SSKELPPQNSDWLYIRAASILRHLYVR-PNVGVGALSKFYGRKQRNGTARNHSAVASRGI 112
Query: 381 ARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRIAAQVR 500
R L L++L LVE G R L+ QG+R+LD IA Q +
Sbjct: 113 IRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELDSIARQCK 153
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 42.7 bits (96), Expect = 0.012
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W Y R A + R +YIR + + F + +I R L+ L+
Sbjct: 53 DWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNI-RYCLKQLQN 111
Query: 411 LKLVEK-VQDGGRILTTQGRRDLDRIAAQV 497
LK++E GGR +T GRRDLDRIA Q+
Sbjct: 112 LKVIETDAVKGGRTITATGRRDLDRIAKQI 141
Score = 36.7 bits (81), Expect = 0.77
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 292 GVKTVTKIFGGRKRNGVTPSHFCRV 366
GV T ++FGG +RNGV P+HF V
Sbjct: 73 GVATYRRVFGGNRRNGVRPNHFADV 97
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 42.3 bits (95), Expect = 0.016
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W+YVR A+ILR +Y + + ++ + + S+ RK LQ LE
Sbjct: 50 DWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEE 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
LV KV GR ++ GR LD A ++
Sbjct: 110 AGLVVKVPGRGRTISPAGRSLLDTTAREI 138
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 41.1 bits (92), Expect = 0.036
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WS---YTFTFLQGHQXSIARKALQS 401
+W+Y+RCAA+LR IY+R V + + S +T T G A +S
Sbjct: 76 DWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGP----LHWACKS 131
Query: 402 LEALKLVEKVQDGGRILTTQGRRDLDRIAAQVRLK 506
L L LVE G+ LT +G + D +A QV+++
Sbjct: 132 LTKLGLVEPGAQSGQRLTRKGHKFADSLAFQVQIR 166
Score = 33.5 bits (73), Expect = 7.2
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
+KT A H + GK+ VP +++K + +E AP +P+
Sbjct: 40 IKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPD 76
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 37.1 bits (82), Expect = 0.58
Identities = 27/89 (30%), Positives = 41/89 (46%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W YVR A++LR +YI + + S + G + SI R LE+
Sbjct: 49 DWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSR-SITRFLFHELES 107
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQV 497
LV+K Q GR L+ QG LD + ++
Sbjct: 108 AGLVQKTQK-GRSLSPQGMSLLDNASKEI 135
>UniRef50_Q9UB95 Cluster: Lipoprotein receptor precursor; n=5;
Caenorhabditis|Rep: Lipoprotein receptor precursor -
Caenorhabditis elegans
Length = 925
Score = 35.5 bits (78), Expect = 1.8
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 230 ELVLCALCCHPSSYLHSLTCLESRLSPRSLVGANVMELHLHISAGSSXQYCTQGFAIVGG 409
+ ++ A C P Y HS+T S + P ++ +E HI + +YC G A + G
Sbjct: 682 DFIMTAKCVCPDGYTHSVT-ENSCIPPVTIEDEENLEKLSHIGSALMAEYCEAGVACMNG 740
Query: 410 IEAC*ESSGRWSHSH 454
AC E +H
Sbjct: 741 -GACRELQNEHGRAH 754
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 35.1 bits (77), Expect = 2.4
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+W++++ ++ILR +YI + + + Q I R LQ LE
Sbjct: 95 DWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQR-RGVAPNHTSLASGKILRSILQQLEN 153
Query: 411 LKLVEK-VQDGGRILTTQGRRDLDRIAAQVRLKAKQQAKQ 527
+ VE+ + GR LTT+G ++ A + K + KQ
Sbjct: 154 IGYVEQNPKKKGRRLTTKGENAINNFARYINKKVYKLEKQ 193
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
+WFY+R AA+LRH+Y P D + ++ ++ I R +Q LE+
Sbjct: 73 DWFYIRAAAVLRHLYFH-PDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLES 131
Query: 411 LKLVEK-VQDGGRILTTQGRRDLDRIAAQV 497
+ +E+ ++ GR L+ +G ++ A Q+
Sbjct: 132 IGFLEQDLKKHGRRLSRKGCNTVNAFARQL 161
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYDPE 232
VK A H+ G ++ P+ +D K + KELAP DP+
Sbjct: 37 VKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPD 73
Score = 33.1 bits (72), Expect = 9.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 292 GVKTVTKIFGGRKRNGVTPSHFCRVIXAVL 381
GV + K++ +KRNG P+H CR +L
Sbjct: 93 GVDRLRKVYSSKKRNGSAPNHTCRASGKIL 122
>UniRef50_UPI0001553850 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 198
Score = 34.3 bits (75), Expect = 4.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 323 GANVMELHLHISAGSSXQYCTQGFAIVGGIEAC*ESSGRWS 445
GA V H +S G S Q C GF GG S G WS
Sbjct: 128 GAGVSSQHCSVSRGHSPQRCEWGFGAGGGASGGSSSGGPWS 168
>UniRef50_Q0V612 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 82
Score = 34.3 bits (75), Expect = 4.1
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 375 SIARKA-LQSLEALKLVEKVQD-GGRILTTQGRRDLDRIAAQVRLKAKQQ 518
S+ RK + L ++E+ +D GGR +T G+RDLDRI AQ L+A+++
Sbjct: 30 SVDRKGHAELLRRFDVLEQDEDKGGRRITQSGQRDLDRI-AQTTLEAEEE 78
>UniRef50_O75093 Cluster: Slit homolog 1 protein precursor; n=144;
Coelomata|Rep: Slit homolog 1 protein precursor - Homo
sapiens (Human)
Length = 1534
Score = 33.5 bits (73), Expect = 7.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>UniRef50_UPI0000E47CE8 Cluster: PREDICTED: similar to breast cancer
anti-estrogen resistance 1; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to breast cancer
anti-estrogen resistance 1 - Strongylocentrotus
purpuratus
Length = 831
Score = 33.1 bits (72), Expect = 9.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 392 SLACNTALMTLQKCEGVTPLRLRPPKILVTVLTPNR*ANVNMTKDGSTTHIEPIQG-HTE 216
SL NT L + + P+R +PP ++ +P++ ++ T H PIQG HT
Sbjct: 96 SLQANTGLSSSMDDYDIPPVRKQPPNATTSLASPHQKQGLH-TSPMQGLHTSPIQGLHTS 154
Query: 215 P 213
P
Sbjct: 155 P 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,179,049
Number of Sequences: 1657284
Number of extensions: 8153299
Number of successful extensions: 20559
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 20013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20536
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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