Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P10
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 79 2e-14
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 79 2e-14
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 79 2e-14
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 79 2e-14
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 79 2e-14
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 79 2e-14
BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 33 1.0
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 33 1.0
AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 33 1.0
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 33 1.0
AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 33 1.0
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein. 33 1.0
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein. 31 4.1
AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19 p... 31 5.5
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 110 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 15 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 110 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 15 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 63 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 121
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 122 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 156
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 27 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 61
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 110 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 15 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 110 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 15 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/95 (46%), Positives = 56/95 (58%)
Frame = +3
Query: 231 NWFYVRCAAILRHIYIRSPVWSQDCHQDLWWAQT*WSYTFTFLQGHQXSIARKALQSLEA 410
NWFY R A+ RH+Y+R + Q F +G + S+AR+ LQ+LE
Sbjct: 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSK-SVARRVLQALEG 109
Query: 411 LKLVEKVQDGGRILTTQGRRDLDRIAAQVRLKAKQ 515
LK+VEK QDGGR LT QG+RDLDRIA QV K+
Sbjct: 110 LKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 122 VKTVAAHLXKTGKVKVPEHMDLVKXARFKELAPYD 226
V+ +AA L K+GK+KVPE +D VK A+ KELAPYD
Sbjct: 15 VRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1534
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1534
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1461
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1534
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1461
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
Length = 1618
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SLDS
Sbjct: 997 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGP 1056
Query: 276 CK 271
C+
Sbjct: 1057 CE 1058
>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
Length = 1534
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 450 ECDHRPELSQQASMPPTIAKPCVQY--CXDDPAEM*RCNSITFAPTKDLGDSLDSKQVSE 277
EC P L+ QA ++ PC C +DP E+ RC + +D SL+S
Sbjct: 913 ECQGPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLNSCSSGP 972
Query: 276 CK 271
C+
Sbjct: 973 CE 974
>AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19
protein.
Length = 18
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 441 GRILTTQGRRDLDRIAAQ 494
GR LT QG+RDLDRIA Q
Sbjct: 1 GRKLTPQGQRDLDRIAGQ 18
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,728,738
Number of Sequences: 237096
Number of extensions: 1383462
Number of successful extensions: 2777
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2758
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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