Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P09
         (846 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641...    31   0.87 
08_01_0888 + 8719416-8719720,8719747-8720482                           30   2.0  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   3.5  
02_05_0522 - 29744368-29745534                                         29   6.2  
07_03_0378 + 17446311-17446514,17446814-17446927,17447124-174472...    28   8.1  
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282...    28   8.1  
04_01_0154 - 1775693-1775942,1776834-1777588                           28   8.1  

>08_01_0722 +
           6412654-6412860,6413142-6413687,6413745-6413877,
           6413917-6414035,6414128-6414883,6415209-6415258,
           6415560-6416679
          Length = 976

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 329 KPPLPARLADSLMQKKPPHTSPLNPE 252
           KPP+PA+  + L QKKPP  SP  P+
Sbjct: 563 KPPIPAKKLEQLAQKKPP--SPPKPK 586


>08_01_0888 + 8719416-8719720,8719747-8720482
          Length = 346

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 329 KPPLPARLADSLMQKKPP 276
           KPP+PA+  + L QKKPP
Sbjct: 300 KPPIPAKKLEQLAQKKPP 317


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
 Frame = +1

Query: 535 LRPPDEHXKNRRSSQRWRN--PTGX*RYQAFPPGNLPXALSCSD--PXRLPXTCPPFSLS 702
           L PP          Q+WR+  PTG   + +FP G LP A       P R P T P F   
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPAT-PLFPSR 71

Query: 703 GKRGAF 720
              G F
Sbjct: 72  VAEGLF 77


>02_05_0522 - 29744368-29745534
          Length = 388

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 128 LWLVQTHQCIYHV*SK*PSXKEIRGRVPHLILXIPYSEW 12
           +W++  H+C +H  S      +I G V H  L +PY  W
Sbjct: 107 VWVI-AHECGHHAFSDYSVLDDIVGLVLHSSLLVPYFSW 144


>07_03_0378 +
           17446311-17446514,17446814-17446927,17447124-17447242,
           17447595-17447641,17447720-17447820,17450769-17450840,
           17451290-17451403,17451495-17451500,17451501-17451611
          Length = 295

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +2

Query: 674 RIPVXLSPFRESVALSHSSRC 736
           R+P+ ++PFR+ VA+ +S+ C
Sbjct: 255 RVPIQVNPFRQPVAVDNSALC 275


>05_01_0361 -
           2824728-2826043,2826288-2826507,2827616-2827702,
           2827726-2827980,2828704-2828733
          Length = 635

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 399 RSPQPNDRAQRVSERGSXRAPNTQTASSRAFGRFINAEKTSPHLPPE 259
           ++PQ  ++ Q+ S R S R P+   +++  +GR    +   P +PPE
Sbjct: 237 KTPQQKEK-QQSSNRPSSRRPSYPKSNASFYGRLHLQKHAYPSVPPE 282


>04_01_0154 - 1775693-1775942,1776834-1777588
          Length = 334

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 812 AVXXXRGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPEREKGGQVXGXR--XGSEQESAX 639
           A    R V A +   ++   P+ D  S   + APR P+RE+GG     R    S +    
Sbjct: 41  ATHARRKVAAGAAGGADAVAPDADPASPVEDLAPRRPDRERGGGGAARRRAASSSRRRRR 100

Query: 638 GRFPGG 621
           G+  GG
Sbjct: 101 GKSVGG 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,974,511
Number of Sequences: 37544
Number of extensions: 409365
Number of successful extensions: 1138
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)