Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P08
         (1004 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g29510.1 68417.m04210 protein arginine N-methyltransferase, p...    34   0.13 
At2g19670.1 68415.m02299 protein arginine N-methyltransferase, p...    31   1.6  

>At4g29510.1 68417.m04210 protein arginine N-methyltransferase,
           putative similar to protein arginine N-methyltransferase
           1-variant 2 [Homo sapiens] GI:7453575
          Length = 390

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +3

Query: 429 DXHXXSXPHFGIXEEMLXDDVRTXTXKN 512
           D +  S  HFGI EEML D VRT T +N
Sbjct: 70  DYYFDSYSHFGIHEEMLKDVVRTKTYQN 97


>At2g19670.1 68415.m02299 protein arginine N-methyltransferase,
           putative similar to protein arginine N-methyltransferase
           1-variant 1 [Homo sapiens] GI:7453577
          Length = 366

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 429 DXHXXSXPHFGIXEEMLXDDVRTXTXKN 512
           D +  S  HFGI EEML D VRT + ++
Sbjct: 46  DYYFDSYSHFGIHEEMLKDVVRTKSYQD 73


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,220,548
Number of Sequences: 28952
Number of extensions: 101334
Number of successful extensions: 141
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2460538344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)