Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P07
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   201   5e-52
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...    49   5e-06
AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical ...    29   3.3  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  201 bits (491), Expect = 5e-52
 Identities = 102/184 (55%), Positives = 125/184 (67%)
 Frame = +1

Query: 100 LDXLKXXSXVVAXXGXFEAXKXXKPTDATTNPSLILSAAGMEXYQHXLDKAIKYGKXNGX 279
           L+ LK  S VVA  G F A K  +PTDATTNPSLIL+A+ ME Y   +D+++ Y K +  
Sbjct: 4   LEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKEHAS 63

Query: 280 SIEXXVAETLDMLSVLFGCEILKIIPGRVSVEVXAXLSFDKDASXAXAIKFIXLFAEHGI 459
             +  +   +D L V+FG EILK IPGRVS EV A LSFD  AS   A+  I  + + GI
Sbjct: 64  GHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEKEGI 123

Query: 460 KXEXILIKLASTWEGIQAAXELEXKHGIHCNLTLLFSLYXAIACAEAHVTLXSPFVGXIL 639
             + ILIKLASTWEGI+AA  LE KHGIHCN+TLLF+   A+ACAE+ VTL SPFVG I+
Sbjct: 124 SKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVGRIM 183

Query: 640 DWXV 651
           DW V
Sbjct: 184 DWFV 187


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +1

Query: 553 LTLLFSLYXAIACAEAHVTLXSPFVGXILDWXV 651
           +TLLF+   A+ACAE+ VTL SPFVG I+DW V
Sbjct: 1   MTLLFNFEQAVACAESGVTLISPFVGRIMDWFV 33


>AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical
           protein Y67H2A.10 protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -3

Query: 331 QKAHSAYPKFQPLXLQWSXHXPFHI**LYQEXADTVPYQQQ 209
           Q  HS YP+ Q +  Q   H P H    YQ+      YQQQ
Sbjct: 479 QPQHSPYPQQQQMHHQMVQHSPHH----YQQQQQQQQYQQQ 515


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,506,045
Number of Sequences: 27780
Number of extensions: 152342
Number of successful extensions: 268
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)