Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P05
         (926 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      105   4e-23
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                        85   1e-16
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                       77   3e-14
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)              56   4e-08

>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  105 bits (253), Expect = 4e-23
 Identities = 64/155 (41%), Positives = 70/155 (45%)
 Frame = +2

Query: 314  KKEKDKXXXXVXGXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDX 493
            +KE+ +    V G DLG    CVGV KNG VE I N  G       V    +GE LIGD 
Sbjct: 693  RKEQREKVGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDG 752

Query: 494  XKXXXXXXXEXXVFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVF 673
             K       E  VFD K  IG  W    V  D+K    KVV+K  K  V V      K F
Sbjct: 753  AKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTF 812

Query: 674  GXEEXXXMVXXKMKENXEXXXGKKVXXXVVXVXXY 778
              EE   MV  KMKE  E   GKKV   VV V  Y
Sbjct: 813  AAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 847


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score = 84.6 bits (200), Expect = 1e-16
 Identities = 51/143 (35%), Positives = 61/143 (42%)
 Frame = +2

Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
           G DLG    CVGV +NG VE I N  G       V    D E L+GD  K       E  
Sbjct: 8   GIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVALNPENT 66

Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEEXXXMVXXK 709
           +FD K  IG  +    V  D+K    K++    K  + V      K F  EE   MV  K
Sbjct: 67  IFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGK 126

Query: 710 MKENXEXXXGKKVXXXVVXVXXY 778
           MKE  E   G+KV   V+ V  Y
Sbjct: 127 MKETAEAYLGQKVTSAVITVPAY 149


>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 51/143 (35%), Positives = 61/143 (42%)
 Frame = +2

Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
           G DLG    CVGV ++G VE I N  G       V    D E LIGD  K       E  
Sbjct: 8   GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPENT 66

Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEEXXXMVXXK 709
           VFD K  IG ++    V  D+      V+ +  +  + V     +K F  EE   MV  K
Sbjct: 67  VFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTK 126

Query: 710 MKENXEXXXGKKVXXXVVXVXXY 778
           MKE  E   G KV   VV V  Y
Sbjct: 127 MKETAEAYLGAKVTDAVVTVPAY 149


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 37/112 (33%), Positives = 46/112 (41%)
 Frame = +2

Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
           G DLG    CVGV ++G VE I N  G       V    D E L+GD  K          
Sbjct: 8   GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DEERLVGDAAKNQVAMNPTNT 66

Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEE 685
           +FD K  IG  +    V  D+K    +VV +  +  V V      K F  EE
Sbjct: 67  IFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEE 118


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,408,161
Number of Sequences: 59808
Number of extensions: 65254
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2693287426
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)