Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P05
(926 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 95 6e-20
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 95 8e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 93 3e-19
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 78 1e-14
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 75 7e-14
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 75 7e-14
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 71 2e-12
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 57 2e-08
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 54 2e-07
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 46 4e-05
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 46 4e-05
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 95.1 bits (226), Expect = 6e-20
Identities = 61/169 (36%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Frame = +2
Query: 281 VLVVXXVCXXXKK--EKDKXXXXVXGXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXV 454
+ V C +K +K+ + G DLG CVGV KNG VE I N G V
Sbjct: 12 ITAVSIYCKEEEKTEKKETKYETIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYV 71
Query: 455 XXXXD-GEXLIGDXXKXXXXXXXEXXVFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXK 631
D G+ LIGD K E +FD K IG +++ V D+K KV++K K
Sbjct: 72 AFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNK 131
Query: 632 XXVXVXXXXGEKVFGXEEXXXMVXXKMKENXEXXXGKKVXXXVVXVXXY 778
V V K F EE MV KMKE E GK+V VV V Y
Sbjct: 132 PSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAY 180
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 94.7 bits (225), Expect = 8e-20
Identities = 58/155 (37%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Frame = +2
Query: 317 KEKDKXXXXVXGXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXD-GEXLIGDX 493
++K+ + G DLG CVGV KNG VE I N G V D G+ LIGD
Sbjct: 26 EKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDA 85
Query: 494 XKXXXXXXXEXXVFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVF 673
K E +FD K IG +++ V D+K KV++K K V V K F
Sbjct: 86 AKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQF 145
Query: 674 GXEEXXXMVXXKMKENXEXXXGKKVXXXVVXVXXY 778
EE MV KMKE E GK+V VV V Y
Sbjct: 146 TPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAY 180
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 93.1 bits (221), Expect = 3e-19
Identities = 62/174 (35%), Positives = 75/174 (43%), Gaps = 2/174 (1%)
Frame = +2
Query: 263 WSLXXLVLVVXXVCXXXKK-EKDKXXXXVXGXDLGXXXXCVGVXKNGXVEXIXNXXGXXX 439
+SL + V C EK++ + G DLG CVGV KNG VE I N G
Sbjct: 4 FSLILIAFVANAYCDEGASTEKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRI 63
Query: 440 XXXXVXXXXD-GEXLIGDXXKXXXXXXXEXXVFDXKXXIGXEWSXXXVXXDVKXXXXKVV 616
V D GE LIGD K E +FD K IG ++ V D+K K+V
Sbjct: 64 TPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIV 123
Query: 617 EKXXKXXVXVXXXXGEKVFGXEEXXXMVXXKMKENXEXXXGKKVXXXVVXVXXY 778
+K K V V K F EE MV KMK+ E G +V VV V Y
Sbjct: 124 DKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAY 177
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 77.8 bits (183), Expect = 1e-14
Identities = 50/143 (34%), Positives = 59/143 (41%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CVG+ +NG VE + N G V D E L+GD K E
Sbjct: 8 GIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENT 66
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEEXXXMVXXK 709
VFD K IG + V D+K V K K V V ++ F EE MV K
Sbjct: 67 VFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAMVLQK 126
Query: 710 MKENXEXXXGKKVXXXVVXVXXY 778
MKE E G V V+ V Y
Sbjct: 127 MKETAEAVLGHSVRDAVITVPAY 149
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 75.4 bits (177), Expect = 5e-14
Identities = 53/144 (36%), Positives = 60/144 (41%), Gaps = 1/144 (0%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CVGV +G VE I N G V D E LIGD K
Sbjct: 8 GIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNT 66
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVE-KXXKXXVXVXXXXGEKVFGXEEXXXMVXX 706
VFD K IG ++ V D+K KV+ + K V V K+F EE MV
Sbjct: 67 VFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLL 126
Query: 707 KMKENXEXXXGKKVXXXVVXVXXY 778
KMKE E G V VV V Y
Sbjct: 127 KMKETAEAFLGTTVKDAVVTVPAY 150
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 74.9 bits (176), Expect = 7e-14
Identities = 49/143 (34%), Positives = 58/143 (40%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CVG+ +NG VE + N G V D E L+GD K E
Sbjct: 8 GIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENT 66
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEEXXXMVXXK 709
VFD K IG + V D K V K K + V ++ F EE MV K
Sbjct: 67 VFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVLQK 126
Query: 710 MKENXEXXXGKKVXXXVVXVXXY 778
MKE E G V V+ V Y
Sbjct: 127 MKETAETYLGHTVKDAVITVPAY 149
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 74.9 bits (176), Expect = 7e-14
Identities = 49/143 (34%), Positives = 58/143 (40%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CVG+ +NG VE + N G V D E L+GD K E
Sbjct: 8 GIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENT 66
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEEXXXMVXXK 709
VFD K IG + V D K V K K + V ++ F EE MV K
Sbjct: 67 VFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVLQK 126
Query: 710 MKENXEXXXGKKVXXXVVXVXXY 778
MKE E G V V+ V Y
Sbjct: 127 MKETAETYLGHTVKDAVITVPAY 149
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 70.5 bits (165), Expect = 2e-12
Identities = 51/144 (35%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CVGV +G VE I N G V D E LIGD K
Sbjct: 8 GIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNT 66
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVE-KXXKXXVXVXXXXGEKVFGXEEXXXMVXX 706
VFD K IG ++ V D+K KV+ + K V V K+F EE MV
Sbjct: 67 VFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLL 126
Query: 707 KMKENXEXXXGKKVXXXVVXVXXY 778
KMK+ E V VV V Y
Sbjct: 127 KMKKTAEAFLEPTVKDAVVTVPTY 150
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 56.8 bits (131), Expect = 2e-08
Identities = 44/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 326 DKXXXXVXGXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXX 505
DK V G DLG CV + + + I N G V DGE L+G K
Sbjct: 27 DKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
Query: 506 XXXXXEXXVFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEE 685
+F K IG + V D+K K+V K V KV+ +
Sbjct: 87 AVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV-KASNGDAWVEAQG--KVYSPSQ 143
Query: 686 XXXMVXXKMKENXEXXXGKKVXXXVVXVXXY 778
V KMKE E G V VV V Y
Sbjct: 144 VGAFVLMKMKETAESYLGTTVNNAVVTVPAY 174
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 53.6 bits (123), Expect = 2e-07
Identities = 43/151 (28%), Positives = 53/151 (35%)
Frame = +2
Query: 326 DKXXXXVXGXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXX 505
DK V G DLG CV + + + I N G V DGE L+G K
Sbjct: 27 DKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
Query: 506 XXXXXEXXVFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEKVFGXEE 685
+F K IG + V D+K K+V K V K + +
Sbjct: 87 AVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV-KASNGDAWVEAQG--KEYPPSQ 143
Query: 686 XXXMVXXKMKENXEXXXGKKVXXXVVXVXXY 778
V KMKE E G V VV V Y
Sbjct: 144 VGAFVLMKMKETAESYLGTTVNNPVVTVPAY 174
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 46.0 bits (104), Expect = 4e-05
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CV +NG V + N G + DG+ LIG K
Sbjct: 4 GIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN-S 62
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEK--VFGXEEXXXMVX 703
+FD K IG + + D+ K VEK + EK F ++
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFK-VEKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
Query: 704 XKMKENXEXXXGKKVXXXVVXVXXY 778
+K N E G +V V+ V Y
Sbjct: 122 RCLKYNAERKLGLEVKSAVITVPAY 146
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 46.0 bits (104), Expect = 4e-05
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +2
Query: 350 GXDLGXXXXCVGVXKNGXVEXIXNXXGXXXXXXXVXXXXDGEXLIGDXXKXXXXXXXEXX 529
G DLG CV +NG V + N G + DG+ LIG K
Sbjct: 4 GIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN-S 62
Query: 530 VFDXKXXIGXEWSXXXVXXDVKXXXXKVVEKXXKXXVXVXXXXGEK--VFGXEEXXXMVX 703
+FD K IG + + D+ K VEK + EK F ++
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFK-VEKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
Query: 704 XKMKENXEXXXGKKVXXXVVXVXXY 778
+K N E G +V V+ V Y
Sbjct: 122 RCLKYNAERKLGLEVKSAVITVPAY 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,588,676
Number of Sequences: 27780
Number of extensions: 52290
Number of successful extensions: 31
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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