Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_P01
         (863 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50671| Best HMM Match : No HMM Matches (HMM E-Value=.)              86   4e-17

>SB_50671| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 403

 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
 Frame = +1

Query: 247 LLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXXXXXX 426
           +L++Y  L    D V A Y+W+DGSGE +RC   TL+  P++ +DLPIWN+         
Sbjct: 14  VLEKYQRLD-QGDRVQALYIWVDGSGEGIRCKSRTLDKPPKSHEDLPIWNFDGSSTAQAE 72

Query: 427 XXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXY--XRXXXHXP 600
                 +L P  I++ PFR GN +LV C  Y +     +T  R  C       +   H P
Sbjct: 73  GCNSDVYLHPINIFKDPFRGGNNILVLCETYQFDHKPTRTNKRKTCFDVMESEKVKPHRP 132

Query: 601 XFG 609
            FG
Sbjct: 133 WFG 135


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,391,603
Number of Sequences: 59808
Number of extensions: 155612
Number of successful extensions: 298
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)