Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P01
(863 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52759-1|CAA36970.1| 365|Drosophila melanogaster glutamine synt... 134 1e-31
AE014298-1617|AAN09632.1| 369|Drosophila melanogaster CG1743-PC... 134 1e-31
BT023772-1|AAZ41780.1| 369|Drosophila melanogaster LP04559p pro... 133 3e-31
AE014298-1616|AAF48043.2| 369|Drosophila melanogaster CG1743-PB... 133 3e-31
X52760-1|CAA36971.1| 399|Drosophila melanogaster glutamine synt... 91 1e-18
AY058730-1|AAL13959.1| 399|Drosophila melanogaster LD47536p pro... 91 1e-18
AJ012460-1|CAA10031.1| 399|Drosophila melanogaster glutamine sy... 91 1e-18
AE014134-43|AAF51546.1| 399|Drosophila melanogaster CG2718-PC, ... 91 1e-18
AE014134-42|AAF51547.1| 399|Drosophila melanogaster CG2718-PB, ... 91 1e-18
>X52759-1|CAA36970.1| 365|Drosophila melanogaster glutamine
synthetase protein.
Length = 365
Score = 134 bits (325), Expect = 1e-31
Identities = 61/138 (44%), Positives = 81/138 (58%)
Frame = +1
Query: 196 LSGPVLKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETP 375
+S +L+ SPNA ++KT+LDRY LPL E+ V ATYVWIDG+GE +RC D TL++ P++P
Sbjct: 1 MSARILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSP 60
Query: 376 KDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXR 555
K+LP+WNY +L P AIY+ PFRRGN +LV C Y + T R
Sbjct: 61 KELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKR 120
Query: 556 IXCXXXYXRXXXHXPXFG 609
C + P FG
Sbjct: 121 KTCLEVANKCAAEEPWFG 138
>AE014298-1617|AAN09632.1| 369|Drosophila melanogaster CG1743-PC,
isoform C protein.
Length = 369
Score = 134 bits (325), Expect = 1e-31
Identities = 61/138 (44%), Positives = 81/138 (58%)
Frame = +1
Query: 196 LSGPVLKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETP 375
+S +L+ SPNA ++KT+LDRY LPL E+ V ATYVWIDG+GE +RC D TL++ P++P
Sbjct: 1 MSARILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSP 60
Query: 376 KDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXR 555
K+LP+WNY +L P AIY+ PFRRGN +LV C Y + T R
Sbjct: 61 KELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKR 120
Query: 556 IXCXXXYXRXXXHXPXFG 609
C + P FG
Sbjct: 121 KTCLEVANKCAAEEPWFG 138
>BT023772-1|AAZ41780.1| 369|Drosophila melanogaster LP04559p
protein.
Length = 369
Score = 133 bits (321), Expect = 3e-31
Identities = 60/134 (44%), Positives = 79/134 (58%)
Frame = +1
Query: 208 VLKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLP 387
+L+ SPNA ++KT+LDRY LPL E+ V ATYVWIDG+GE +RC D TL++ P++PK+LP
Sbjct: 5 ILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELP 64
Query: 388 IWNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCX 567
+WNY +L P AIY+ PFRRGN +LV C Y + T R C
Sbjct: 65 VWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCL 124
Query: 568 XXYXRXXXHXPXFG 609
+ P FG
Sbjct: 125 EVANKCAAEEPWFG 138
>AE014298-1616|AAF48043.2| 369|Drosophila melanogaster CG1743-PB,
isoform B protein.
Length = 369
Score = 133 bits (321), Expect = 3e-31
Identities = 60/134 (44%), Positives = 79/134 (58%)
Frame = +1
Query: 208 VLKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLP 387
+L+ SPNA ++KT+LDRY LPL E+ V ATYVWIDG+GE +RC D TL++ P++PK+LP
Sbjct: 5 ILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELP 64
Query: 388 IWNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCX 567
+WNY +L P AIY+ PFRRGN +LV C Y + T R C
Sbjct: 65 VWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCL 124
Query: 568 XXYXRXXXHXPXFG 609
+ P FG
Sbjct: 125 EVANKCAAEEPWFG 138
>X52760-1|CAA36971.1| 399|Drosophila melanogaster glutamine
synthetase protein.
Length = 399
Score = 91.5 bits (217), Expect = 1e-18
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 LKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPI 390
L SPN L K++L RY +L P + V ATY+WIDG+GE +R D L+ P + +DLP
Sbjct: 36 LANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPD 95
Query: 391 WNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRG-NXVLVXCXXY 519
W Y LKP+AIYR PF+ G N V+V C Y
Sbjct: 96 WQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTY 139
>AY058730-1|AAL13959.1| 399|Drosophila melanogaster LD47536p
protein.
Length = 399
Score = 91.5 bits (217), Expect = 1e-18
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 LKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPI 390
L SPN L K++L RY +L P + V ATY+WIDG+GE +R D L+ P + +DLP
Sbjct: 36 LANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPD 95
Query: 391 WNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRG-NXVLVXCXXY 519
W Y LKP+AIYR PF+ G N V+V C Y
Sbjct: 96 WQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTY 139
>AJ012460-1|CAA10031.1| 399|Drosophila melanogaster glutamine
synthetase I protein.
Length = 399
Score = 91.5 bits (217), Expect = 1e-18
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 LKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPI 390
L SPN L K++L RY +L P + V ATY+WIDG+GE +R D L+ P + +DLP
Sbjct: 36 LANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPD 95
Query: 391 WNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRG-NXVLVXCXXY 519
W Y LKP+AIYR PF+ G N V+V C Y
Sbjct: 96 WQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTY 139
>AE014134-43|AAF51546.1| 399|Drosophila melanogaster CG2718-PC,
isoform C protein.
Length = 399
Score = 91.5 bits (217), Expect = 1e-18
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 LKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPI 390
L SPN L K++L RY +L P + V ATY+WIDG+GE +R D L+ P + +DLP
Sbjct: 36 LANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPD 95
Query: 391 WNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRG-NXVLVXCXXY 519
W Y LKP+AIYR PF+ G N V+V C Y
Sbjct: 96 WQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTY 139
>AE014134-42|AAF51547.1| 399|Drosophila melanogaster CG2718-PB,
isoform B protein.
Length = 399
Score = 91.5 bits (217), Expect = 1e-18
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 LKXSPNAFLSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPI 390
L SPN L K++L RY +L P + V ATY+WIDG+GE +R D L+ P + +DLP
Sbjct: 36 LANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPD 95
Query: 391 WNYXXXXXXXXXXXXXXXHLKPQAIYRXPFRRG-NXVLVXCXXY 519
W Y LKP+AIYR PF+ G N V+V C Y
Sbjct: 96 WQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTY 139
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,916,063
Number of Sequences: 53049
Number of extensions: 247210
Number of successful extensions: 519
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -