Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_P01
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 79 3e-15
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 79 3e-15
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 68 8e-12
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/125 (32%), Positives = 55/125 (44%)
Frame = +1
Query: 235 LSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXX 414
L + +D + LP ATYVWIDG+GE +R T N P+ + PIWNY
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 415 XXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXYXRXXXH 594
+L+P A++ PF +G+ VLV C + T R C + H
Sbjct: 72 GQAEGLNSDRYLRPVAVFPDPFLQGHNVLVMCETLDETMKPTATNHRQNCAAIMKKVAEH 131
Query: 595 XPXFG 609
P FG
Sbjct: 132 HPWFG 136
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/123 (33%), Positives = 55/123 (44%)
Frame = +1
Query: 241 KTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXXXX 420
K +L ++ +L + A Y+WIDGSGE +R T ++ P P+ LPIWN+
Sbjct: 13 KQVLQKFLNLD-QKGMYQALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQ 71
Query: 421 XXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXYXRXXXHXP 600
+LKP AIY PFR+G LV C Y T R C + P
Sbjct: 72 AEGADSDVYLKPVAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHP 131
Query: 601 XFG 609
FG
Sbjct: 132 WFG 134
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/123 (33%), Positives = 55/123 (44%)
Frame = +1
Query: 241 KTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXXXX 420
K +L ++ +L + A Y+WIDGSGE +R T ++ P P+ LPIWN+
Sbjct: 16 KQVLQKFLNLD-QKGMYQALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQ 74
Query: 421 XXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXYXRXXXHXP 600
+LKP AIY PFR+G LV C Y T R C + P
Sbjct: 75 AEGADSDVYLKPVAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHP 134
Query: 601 XFG 609
FG
Sbjct: 135 WFG 137
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 76.2 bits (179), Expect = 3e-14
Identities = 39/125 (31%), Positives = 53/125 (42%)
Frame = +1
Query: 235 LSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXX 414
L + +D + LP ATYVWIDG+GE +R T+N P+ + PIWNY
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 415 XXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXYXRXXXH 594
+L+P A++ PF G VLV C + T R C +
Sbjct: 72 GQADGLNSDRYLRPVAVFPDPFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSDQ 131
Query: 595 XPXFG 609
P FG
Sbjct: 132 QPWFG 136
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/125 (30%), Positives = 51/125 (40%)
Frame = +1
Query: 235 LSKTLLDRYXDLPLPEDXVLATYVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXX 414
L ++D++ L + ATYVWIDG+GE +R T + P+ +D PIWNY
Sbjct: 12 LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71
Query: 415 XXXXXXXXXXHLKPQAIYRXPFRRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXYXRXXXH 594
+L+P A Y PF G LV C + T R C
Sbjct: 72 GQAKGRDSDRYLRPVAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMHEIRDT 131
Query: 595 XPXFG 609
P FG
Sbjct: 132 RPWFG 136
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 68.1 bits (159), Expect = 8e-12
Identities = 31/103 (30%), Positives = 45/103 (43%)
Frame = +1
Query: 301 YVWIDGSGEXVRCXDXTLNYXPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRXPF 480
Y+WID + E +R T ++ P+TP DLPIWN+ +++P A+YR PF
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIALYRDPF 94
Query: 481 RRGNXVLVXCXXYXYSXXXXKTXXRIXCXXXYXRXXXHXPXFG 609
R G + C + T R C + P FG
Sbjct: 95 RPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFG 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,207,450
Number of Sequences: 27780
Number of extensions: 115052
Number of successful extensions: 234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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