Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O23
(888 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.02c |||conserved protein|Schizosaccharomyces pombe|chr 1... 31 0.29
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.67
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 3.6
SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|c... 27 4.7
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 4.7
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 26 6.2
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 6.2
SPBC14C8.09c |||conserved fungal protein|Schizosaccharomyces pom... 26 6.2
SPCC1020.08 |||wybutosine biosynthesis protein Tyw1|Schizosaccha... 26 8.2
SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 26 8.2
>SPAC4A8.02c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 142
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 729 SVSLHIQRTTYGXVIREHFDADTRADL 809
+V+ IQ T+ I E++DADTRAD+
Sbjct: 38 TVNFFIQHTSAALTINENWDADTRADM 64
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 575 LLLVPVRMHYYVRRMENNTTAVAGVIYSGD 664
L L P+ HY++ R+ AV G Y+G+
Sbjct: 163 LKLSPIEAHYHLLRLVEQVNAVIGTFYTGE 192
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +1
Query: 346 NRIISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAAS 525
N ++S+LH KED+G+P D L S ++ + LV +L P A
Sbjct: 275 NDVVSVLHN-KEDSGLPCDLLLLSGSCVVNEAMLSGESTPLVKESIELRPEEAVIDVDEL 333
Query: 526 DTAGSLFTG 552
D LF G
Sbjct: 334 DKNAVLFGG 342
>SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 365 SMLMILLAHPSIPRVQWFVPRPLALPTTRPASSHITRFE*VAPPSTPP 222
S L L + PS+ R W + L LP+TR S T F+ PP
Sbjct: 3 SKLFCLRSFPSVQRTAW---QRLVLPSTRKFSLTPTTFDKTPSGRIPP 47
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 324 SPMVRAETFSSPNDTSSFVAYHKVRVSCSSLYSTEK 217
S + A S PN T F+AYHK + T+K
Sbjct: 1262 SVLFHAGKSSDPNLTVDFLAYHKAAADTFEVAKTQK 1297
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 375 GLVQHAYDPIGASVYSKSPMVRAETFSSPNDTSSFVAYHKV 253
GLV+ YDPIG V+ +R +S + S V V
Sbjct: 466 GLVERFYDPIGGQVFLDGKDLRTLNVASLRNQISLVQQEPV 506
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -1
Query: 393 DPCVFFGLVQHAYDPIGASVYSKSPMVRAETFSSPN 286
+P +FG V H P G S S S + F N
Sbjct: 56 NPASYFGTVSHPVTPAGVSTDSLSSPIETNKFFDNN 91
>SPBC14C8.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 144
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 401 SLGIPASSLASCSMLMILLAHPSIPRVQWFVPR--PLALPTTR 279
SL +P SL CS + L+ + +FVP P LP R
Sbjct: 16 SLAVPKQSLQECSYMSNLITDRESTFLSYFVPSKDPKMLPVYR 58
>SPCC1020.08 |||wybutosine biosynthesis protein
Tyw1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 688
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 551 EHRTEAWFLLLVPVRMHYYVRR 616
E+R + +LL+PV +H+ +RR
Sbjct: 14 EYRAVLYIVLLLPVLIHFLIRR 35
>SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 508 AVYAASDTAGSLFTGAPDGGMVLIAGTGSNA 600
++YA+ DT+ S FT D L+ SNA
Sbjct: 23 SMYASRDTSTSSFTNPTDSSTRLLYNNASNA 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,184,739
Number of Sequences: 5004
Number of extensions: 62397
Number of successful extensions: 152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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