Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O23
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457271-1|CAG33552.1| 344|Homo sapiens NAGK protein. 132 2e-30
BC001029-1|AAH01029.1| 344|Homo sapiens N-acetylglucosamine kin... 132 2e-30
AK222645-1|BAD96365.1| 344|Homo sapiens N-Acetylglucosamine kin... 132 2e-30
AK001812-1|BAA91923.1| 344|Homo sapiens protein ( Homo sapiens ... 132 2e-30
AC007881-1|AAY14748.1| 344|Homo sapiens unknown protein. 132 2e-30
AJ242910-1|CAB61848.1| 344|Homo sapiens N-Acetylglucosamine kin... 129 1e-29
BC005371-1|AAH05371.1| 344|Homo sapiens N-acetylglucosamine kin... 124 3e-28
BC039704-1|AAH39704.1| 217|Homo sapiens MLXIP protein protein. 33 1.8
BC028309-1|AAH28309.1| 453|Homo sapiens MLXIP protein protein. 33 1.8
AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein. 33 1.8
AF245481-1|AAL55690.1| 379|Homo sapiens Mlx interactor beta pro... 33 1.8
AF245480-1|AAL55689.1| 526|Homo sapiens Mlx interactor alpha pr... 33 1.8
AB020674-1|BAA74890.2| 568|Homo sapiens KIAA0867 protein protein. 33 1.8
BC021201-1|AAH21201.1| 331|Homo sapiens junctional sarcoplasmic... 31 5.6
AK056978-1|BAB71330.1| 331|Homo sapiens protein ( Homo sapiens ... 31 5.6
Z46376-1|CAA86511.1| 917|Homo sapiens Human hexokinase II cDNA ... 30 9.8
Z46354-1|CAA86476.2| 916|Homo sapiens hexokinase II protein. 30 9.8
D25412-1|BAA04999.1| 126|Homo sapiens type 2 hexokinase protein. 30 9.8
BC064369-1|AAH64369.1| 917|Homo sapiens hexokinase 2 protein. 30 9.8
BC021116-1|AAH21116.1| 917|Homo sapiens hexokinase 2 protein. 30 9.8
AY623118-1|AAT38114.1| 917|Homo sapiens hexokinase 2 protein. 30 9.8
AF148513-1|AAD30174.1| 917|Homo sapiens hexokinase II protein. 30 9.8
AC104135-1|AAY24209.1| 573|Homo sapiens unknown protein. 30 9.8
>CR457271-1|CAG33552.1| 344|Homo sapiens NAGK protein.
Length = 344
Score = 132 bits (318), Expect = 2e-30
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNHW +G D C RI M++ AK AG+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L SLGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>BC001029-1|AAH01029.1| 344|Homo sapiens N-acetylglucosamine kinase
protein.
Length = 344
Score = 132 bits (318), Expect = 2e-30
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNHW +G D C RI M++ AK AG+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L SLGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>AK222645-1|BAD96365.1| 344|Homo sapiens N-Acetylglucosamine kinase
variant protein.
Length = 344
Score = 132 bits (318), Expect = 2e-30
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNHW +G D C RI M++ AK AG+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L SLGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>AK001812-1|BAA91923.1| 344|Homo sapiens protein ( Homo sapiens
cDNA FLJ10950 fis, clone PLACE1000185. ).
Length = 344
Score = 132 bits (318), Expect = 2e-30
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNHW +G D C RI M++ AK AG+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L SLGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>AC007881-1|AAY14748.1| 344|Homo sapiens unknown protein.
Length = 344
Score = 132 bits (318), Expect = 2e-30
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNHW +G D C RI M++ AK AG+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L SLGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>AJ242910-1|CAB61848.1| 344|Homo sapiens N-Acetylglucosamine kinase
protein.
Length = 344
Score = 129 bits (312), Expect = 1e-29
Identities = 60/139 (43%), Positives = 85/139 (61%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNHW +G D C RI M++ AK AG+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L LGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRILGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGIVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>BC005371-1|AAH05371.1| 344|Homo sapiens N-acetylglucosamine kinase
protein.
Length = 344
Score = 124 bits (300), Expect = 3e-28
Identities = 59/139 (42%), Positives = 84/139 (60%)
Frame = +1
Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
+GGVEGG T S +++ E G+++ A GL TNH +G D C RI M++ AK G+
Sbjct: 5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHRLIGTDKCVERINEMVNRAKRKVGVDP 64
Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLI 579
L SLGL+LSG +QE + L+ ++D P +++ +D AGS+ T PDGG+VLI
Sbjct: 65 LVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 124
Query: 580 AGTGSNALLRTSDGEQHNC 636
+GTGSN L DG + C
Sbjct: 125 SGTGSNCRLINPDGSESGC 143
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 659 GDEGGAYWIAHKAVXSVIDDVDGLRISPY 745
GDEG AYWIAH+AV V D +D L +P+
Sbjct: 151 GDEGSAYWIAHQAVKIVFDSIDNLEAAPH 179
>BC039704-1|AAH39704.1| 217|Homo sapiens MLXIP protein protein.
Length = 217
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 389 PASSLASCSMLMILLAHPSIPRVQWFVPRPLALPTTRPASSH 264
PA S A C + + + P PR+ + P+P++L RP H
Sbjct: 103 PAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPH 144
>BC028309-1|AAH28309.1| 453|Homo sapiens MLXIP protein protein.
Length = 453
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 389 PASSLASCSMLMILLAHPSIPRVQWFVPRPLALPTTRPASSH 264
PA S A C + + + P PR+ + P+P++L RP H
Sbjct: 339 PAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPH 380
>AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein.
Length = 919
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 389 PASSLASCSMLMILLAHPSIPRVQWFVPRPLALPTTRPASSH 264
PA S A C + + + P PR+ + P+P++L RP H
Sbjct: 514 PAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPH 555
>AF245481-1|AAL55690.1| 379|Homo sapiens Mlx interactor beta
protein.
Length = 379
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 389 PASSLASCSMLMILLAHPSIPRVQWFVPRPLALPTTRPASSH 264
PA S A C + + + P PR+ + P+P++L RP H
Sbjct: 121 PAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPH 162
>AF245480-1|AAL55689.1| 526|Homo sapiens Mlx interactor alpha
protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 389 PASSLASCSMLMILLAHPSIPRVQWFVPRPLALPTTRPASSH 264
PA S A C + + + P PR+ + P+P++L RP H
Sbjct: 121 PAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPH 162
>AB020674-1|BAA74890.2| 568|Homo sapiens KIAA0867 protein protein.
Length = 568
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 389 PASSLASCSMLMILLAHPSIPRVQWFVPRPLALPTTRPASSH 264
PA S A C + + + P PR+ + P+P++L RP H
Sbjct: 163 PAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPH 204
>BC021201-1|AAH21201.1| 331|Homo sapiens junctional sarcoplasmic
reticulum protein 1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 344 AHPSIPRVQWFVPRPLALPTTRPA--SSHITRFE*VAPPSTPP 222
A P +Q VP P P++ P SS + +FE APPS PP
Sbjct: 147 AVPGEAALQARVPEPWVPPSSAPREPSSPLPKFEAQAPPSAPP 189
>AK056978-1|BAB71330.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ32416 fis, clone SKMUS2000774, weakly similar to
BALBIANI RING PROTEIN 1. ).
Length = 331
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 344 AHPSIPRVQWFVPRPLALPTTRPA--SSHITRFE*VAPPSTPP 222
A P +Q VP P P++ P SS + +FE APPS PP
Sbjct: 147 AVPGEAALQARVPEPWVPPSSAPREPSSPLPKFEAQAPPSAPP 189
>Z46376-1|CAA86511.1| 917|Homo sapiens Human hexokinase II cDNA
protein.
Length = 917
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 622 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 681
Query: 592 SNA 600
SNA
Sbjct: 682 SNA 684
>Z46354-1|CAA86476.2| 916|Homo sapiens hexokinase II protein.
Length = 916
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 622 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 681
Query: 592 SNA 600
SNA
Sbjct: 682 SNA 684
>D25412-1|BAA04999.1| 126|Homo sapiens type 2 hexokinase protein.
Length = 126
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 9 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 68
Query: 592 SNA 600
SNA
Sbjct: 69 SNA 71
>BC064369-1|AAH64369.1| 917|Homo sapiens hexokinase 2 protein.
Length = 917
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 622 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 681
Query: 592 SNA 600
SNA
Sbjct: 682 SNA 684
>BC021116-1|AAH21116.1| 917|Homo sapiens hexokinase 2 protein.
Length = 917
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 622 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 681
Query: 592 SNA 600
SNA
Sbjct: 682 SNA 684
>AY623118-1|AAT38114.1| 917|Homo sapiens hexokinase 2 protein.
Length = 917
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 622 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 681
Query: 592 SNA 600
SNA
Sbjct: 682 SNA 684
>AF148513-1|AAD30174.1| 917|Homo sapiens hexokinase II protein.
Length = 917
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 622 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 681
Query: 592 SNA 600
SNA
Sbjct: 682 SNA 684
>AC104135-1|AAY24209.1| 573|Homo sapiens unknown protein.
Length = 573
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 GLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGA---PDGGMVLIAGTG 591
G SGCE E L + + V +DT G++ T P + LI GTG
Sbjct: 278 GFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGFEDPHCEVGLIVGTG 337
Query: 592 SNA 600
SNA
Sbjct: 338 SNA 340
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,331,262
Number of Sequences: 237096
Number of extensions: 2499346
Number of successful extensions: 9572
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9569
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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