Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O23
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069061-1|AAL39206.1|  348|Drosophila melanogaster GH07590p pro...   177   1e-44
AE014297-2014|AAF55174.1|  348|Drosophila melanogaster CG6218-PA...   177   1e-44
M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.         29   6.5  
AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB...    29   6.5  

>AY069061-1|AAL39206.1|  348|Drosophila melanogaster GH07590p
           protein.
          Length = 348

 Score =  177 bits (432), Expect = 1e-44
 Identities = 83/140 (59%), Positives = 101/140 (72%)
 Frame = +1

Query: 217 FFGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIP 396
           +FGGVEGGATHS LVICDE+G+ VG   GLGTNHW +GI  CA RI  M+  AKE+AGIP
Sbjct: 3   YFGGVEGGATHSRLVICDESGQSVGATSGLGTNHWGIGIPECARRIADMVERAKEEAGIP 62

Query: 397 KDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVL 576
           K+  L SLGL+LSGCEQE++N EL   ++   P  A+    +SDT GS++T +  GGMVL
Sbjct: 63  KETPLTSLGLSLSGCEQEATNRELEQELRTTFPGLAQNYAVSSDTMGSMYTASSIGGMVL 122

Query: 577 IAGTGSNALLRTSDGEQHNC 636
           I+GTGSN LLR  DG   NC
Sbjct: 123 ISGTGSNCLLRNPDGSTSNC 142



 Score = 36.3 bits (80), Expect = 0.057
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 768 VIREHFDADTRADLLPHAYKXFNK 839
           +I+EHF  +TR D+LPH Y  F+K
Sbjct: 186 LIKEHFSLETRLDMLPHCYAKFDK 209


>AE014297-2014|AAF55174.1|  348|Drosophila melanogaster CG6218-PA
           protein.
          Length = 348

 Score =  177 bits (432), Expect = 1e-44
 Identities = 83/140 (59%), Positives = 101/140 (72%)
 Frame = +1

Query: 217 FFGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIP 396
           +FGGVEGGATHS LVICDE+G+ VG   GLGTNHW +GI  CA RI  M+  AKE+AGIP
Sbjct: 3   YFGGVEGGATHSRLVICDESGQSVGATSGLGTNHWGIGIPECARRIADMVERAKEEAGIP 62

Query: 397 KDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVL 576
           K+  L SLGL+LSGCEQE++N EL   ++   P  A+    +SDT GS++T +  GGMVL
Sbjct: 63  KETPLTSLGLSLSGCEQEATNRELEQELRTTFPGLAQNYAVSSDTMGSMYTASSIGGMVL 122

Query: 577 IAGTGSNALLRTSDGEQHNC 636
           I+GTGSN LLR  DG   NC
Sbjct: 123 ISGTGSNCLLRNPDGSTSNC 142



 Score = 36.3 bits (80), Expect = 0.057
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 768 VIREHFDADTRADLLPHAYKXFNK 839
           +I+EHF  +TR D+LPH Y  F+K
Sbjct: 186 LIKEHFSLETRLDMLPHCYAKFDK 209


>M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.
          Length = 2038

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +1

Query: 535  GSLFTGAPDGGMVLIAGTG---SNALLRTSDGEQHN 633
            GS F GAP  G ++ AG G   + A +  S G+QHN
Sbjct: 1192 GSNFGGAPAPGNMMHAGAGVPVAGAAVSASTGQQHN 1227


>AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB,
            isoform B protein.
          Length = 2038

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +1

Query: 535  GSLFTGAPDGGMVLIAGTG---SNALLRTSDGEQHN 633
            GS F GAP  G ++ AG G   + A +  S G+QHN
Sbjct: 1192 GSNFGGAPAPGNMMHAGAGVPVAGAAVSASTGQQHN 1227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,814,273
Number of Sequences: 53049
Number of extensions: 753012
Number of successful extensions: 2095
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)