Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O23
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23522-2|AAC46818.1|  521|Caenorhabditis elegans Hypothetical pr...    62   5e-10

>U23522-2|AAC46818.1|  521|Caenorhabditis elegans Hypothetical
           protein W06B4.2 protein.
          Length = 521

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
 Frame = +1

Query: 220 FGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPK 399
           + G+EGGAT S LVI D        +   GTN +         RI   + E  E   +  
Sbjct: 196 YAGIEGGATGSKLVIIDADTNQRYTSSTEGTNFFLTDHTIVCKRIADWILEVFEKEKLDI 255

Query: 400 DQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAP--DGGMV 573
              L +LGL LSG E E  N + V   +       +  Y  SD   +L    P  + G+V
Sbjct: 256 KN-LKALGLGLSGAEDEEFNKKFVDYFRQNHGNVTENFYLTSDAVMTLLANFPGEENGIV 314

Query: 574 LIAGTGSNALLRTSDG 621
           LIAGTGS+  L+  DG
Sbjct: 315 LIAGTGSSCRLKIRDG 330



 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 659 GDEGGAYWIAHKAVXSVIDDVDG 727
           GD G A+WIA  A+  + D  DG
Sbjct: 343 GDGGSAFWIARTAIQMLFDAEDG 365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,411
Number of Sequences: 27780
Number of extensions: 366295
Number of successful extensions: 915
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)