Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O22
(887 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 181 2e-44
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 148 2e-34
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 132 2e-29
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 129 1e-28
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 116 6e-25
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 114 2e-24
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 112 1e-23
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 112 1e-23
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 107 5e-22
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 102 1e-20
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 101 2e-20
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 100 1e-19
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 85 2e-15
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 71 5e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 71 5e-11
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 70 7e-11
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 66 1e-09
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 50 8e-05
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 46 0.001
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 42 0.016
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.20
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.20
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 38 0.45
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 2.4
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 5.6
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 5.6
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 33 9.7
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 9.7
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 9.7
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 181 bits (440), Expect = 2e-44
Identities = 96/171 (56%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
Frame = +3
Query: 81 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
SR+ R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123
Query: 441 DQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
DQLAL +P G TVL G R + + R APG P SHTK YVR+KG
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRH---FGKAPGTPHSHTKPYVRSKG 171
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 148 bits (359), Expect = 2e-34
Identities = 79/164 (48%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Frame = +3
Query: 99 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 278
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 279 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 458
M+ +EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 459 APTGKKTVL-GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
P +L G ++A+ V+ APG P SHTK YVR+KG
Sbjct: 126 LPLTDTVLLRGPKNAREAVKH---FGPAPGVPHSHTKPYVRSKG 166
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 132 bits (318), Expect = 2e-29
Identities = 62/100 (62%), Positives = 81/100 (81%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 485
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVL 108
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 129 bits (311), Expect = 1e-28
Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 2/143 (1%)
Frame = +3
Query: 93 KHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLA 272
+H R RT KS ++ T+A FN++VL+ LF+S+INRPP+SVSR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 273 RHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLA 452
R +K+ VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA
Sbjct: 69 RALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLA 128
Query: 453 LRAPTGKKTVL--GTRSAKMLVR 515
+RAP G+ T++ G R+++ VR
Sbjct: 129 VRAPKGQNTLILRGPRNSREAVR 151
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 116 bits (280), Expect = 6e-25
Identities = 63/134 (47%), Positives = 83/134 (61%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLGTRSAKMLVRQCVTLXLAPG 545
V AL TE AR RI+ AGGE LTFDQLALR PTGK +L K + APG
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAE-KHFGSAPG 212
Query: 546 APXSHTKXYVRTKG 587
P S + YVR+KG
Sbjct: 213 RPKSKARPYVRSKG 226
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 114 bits (275), Expect = 2e-24
Identities = 65/134 (48%), Positives = 88/134 (65%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLGTRSAKMLVRQCVTLXLAPG 545
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L + K R+ V
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATK--AREAVKHF--RN 153
Query: 546 APXSHTKXYVRTKG 587
+ K YVR+KG
Sbjct: 154 EVKGNPKPYVRSKG 167
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 112 bits (270), Expect = 1e-23
Identities = 67/131 (51%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
T+++FN VLRRL +R R PISVSRL + + + VVVGTVT+D RL +PK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLGTRSAKMLVRQCVT-LXLAP 542
V AL TE AR RILAAGG+ LTFDQLA + PTG T+L R K VR+ + A
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTIL-LRGPK--VREALKHFGRAA 371
Query: 543 GAPXSHTKXYV 575
G P SH K YV
Sbjct: 372 GLPGSHAKPYV 382
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 112 bits (270), Expect = 1e-23
Identities = 68/140 (48%), Positives = 88/140 (62%), Gaps = 6/140 (4%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 347
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 348 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLGTRSAKMLVRQCVT 527
+IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L R K R+ V
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYL-LRGRKS-GRESVR 157
Query: 528 LXLAPGAPXSHTKXYVRTKG 587
A G P SH+K Y +G
Sbjct: 158 HFGASGVPGSHSKPYATNRG 177
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 107 bits (256), Expect = 5e-22
Identities = 68/164 (41%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Frame = +3
Query: 102 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 281
RKV R E KS + T F +++ +RL +S+ NRP +SVSRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 282 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 461
K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG ++FD+L
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEK 129
Query: 462 PTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
PTG VL G RS + + ++ +PG P SH K KG
Sbjct: 130 PTGDNCVLLQGRRSCRAVCKK----FGSPGRPNSHVKPKGEHKG 169
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 102 bits (244), Expect = 1e-20
Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Frame = +3
Query: 240 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 419
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 420 GGEILTFDQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
GG+ LTFDQLAL +P TVL G R + + A G P SHTK YVR+KG
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWH---FDKALGTPHSHTKPYVRSKG 207
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 101 bits (242), Expect = 2e-20
Identities = 63/130 (48%), Positives = 78/130 (60%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
T++ FN VLRRL +R R PISVSRL + + + VVVGTVT+DVRL +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLGTRSAKMLVRQCVTLXLAPG 545
V TE AR RILAAGG+ LTFDQLA + PTG T+L R ++ + A G
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTIL-LRGPRVR-EELKHFGRAAG 448
Query: 546 APXSHTKXYV 575
P SH K YV
Sbjct: 449 LPGSHAKPYV 458
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 99.5 bits (237), Expect = 1e-19
Identities = 59/135 (43%), Positives = 76/135 (56%)
Frame = +3
Query: 81 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
D++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 4 DLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVST 63
Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
S+LA MKK E AV V TVT D R Y +PKM V AL T+ A A I AGG+ L F
Sbjct: 64 SKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRF 120
Query: 441 DQLALRAPTGKKTVL 485
D+LAL+APTG+KTVL
Sbjct: 121 DELALKAPTGRKTVL 135
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 85.4 bits (202), Expect = 2e-15
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +3
Query: 246 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 425
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 426 EILTFDQLALRAPTG-KKTVLGTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
+IL+FDQLA+ +P G +K G R L G+P S+ K YV + G
Sbjct: 107 KILSFDQLAMTSPKGPQKCYQGYRH----------LGKVSGSPHSYAKPYVGSTG 151
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = +3
Query: 102 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 281
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 282 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 410
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = +3
Query: 102 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 281
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 282 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 410
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 70.1 bits (164), Expect = 7e-11
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +3
Query: 81 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+++
Sbjct: 113 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLAL 172
Query: 261 SRL 269
SR+
Sbjct: 173 SRM 175
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/85 (45%), Positives = 50/85 (58%)
Frame = +3
Query: 333 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLGTRSAKMLV 512
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L K
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETK--A 182
Query: 513 RQCVTLXLAPGAPXSHTKXYVRTKG 587
R+ V + K YVR+KG
Sbjct: 183 REAVKHF--RNEVKGNPKPYVRSKG 205
Score = 56.4 bits (130), Expect = 9e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 366 TVAALHVT 389
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 50.0 bits (114), Expect = 8e-05
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +3
Query: 195 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 374
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 375 ALHVTEKARARILAAGGEILTFDQL 449
AL+ + + +I+ GG+I +++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEI 149
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = -1
Query: 461 STKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDXPHYHGNQTLTSWLL 282
S+ SQLI+S F++S Q+ +SS+ L S VI + + +++LL
Sbjct: 77 SSNSQLIQSDGFTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLL 136
Query: 281 HVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 180
+R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 137 QGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 42.3 bits (95), Expect = 0.016
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +3
Query: 279 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 458
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 459 APTG 470
P G
Sbjct: 112 YPRG 115
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.20
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -2
Query: 427 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 248
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 247 GRLI 236
G LI
Sbjct: 63 GSLI 66
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 38.7 bits (86), Expect = 0.20
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +3
Query: 243 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 422
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 423 GEILTFDQLALRAPTGKKTVL 485
G + F +L PTGK VL
Sbjct: 104 GRVTGFAELTKEFPTGKGVVL 124
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 37.5 bits (83), Expect = 0.45
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +3
Query: 201 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 377
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 378 LHVTEKARARILAAGGEILTFDQLALRAPTG 470
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 267 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 380
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 5.6
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +3
Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 473
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 33.9 bits (74), Expect = 5.6
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +3
Query: 189 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 365
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTG 470
VAA + AR +I AAGGE LT +L P G
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 33.1 bits (72), Expect = 9.7
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = -1
Query: 449 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDXPHYHGNQTLTSWLLHVAR 270
+L KS +F +S+N T+ FGNMK S ++ + V+ + +Y+ + +++ +
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVEVILKSRDKNYYETVYVREKAINIFK 279
Query: 269 QTRHRDW 249
Q+ D+
Sbjct: 280 QSDDFDY 286
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.1 bits (72), Expect = 9.7
Identities = 27/94 (28%), Positives = 46/94 (48%)
Frame = +3
Query: 189 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 368
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 369 VAALHVTEKARARILAAGGEILTFDQLALRAPTG 470
VAA ++KA+ +I +AGGE ++ D + P G
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKG 114
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 33.1 bits (72), Expect = 9.7
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 210 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 389
+ +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 390 EKARARILAAGGEILTFDQLALRAPTG 470
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,962,451
Number of Sequences: 1657284
Number of extensions: 13839311
Number of successful extensions: 34436
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34402
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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