Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O22
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18 pro...   181   4e-45
BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18 p...   181   4e-45
BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18 p...   181   4e-45
AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18 p...   181   4e-45
BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18 p...   179   1e-44
DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18 p...   157   4e-38

>L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  181 bits (440), Expect = 4e-45
 Identities = 96/171 (56%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = +3

Query: 81  DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
           DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+S+
Sbjct: 4   DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63

Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
           SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64  SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123

Query: 441 DQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
           DQLAL +P G  TVL  G R  + + R       APG P SHTK YVR+KG
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRH---FGKAPGTPHSHTKPYVRSKG 171


>BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  181 bits (440), Expect = 4e-45
 Identities = 96/171 (56%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = +3

Query: 81  DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
           DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+S+
Sbjct: 4   DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63

Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
           SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64  SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123

Query: 441 DQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
           DQLAL +P G  TVL  G R  + + R       APG P SHTK YVR+KG
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRH---FGKAPGTPHSHTKPYVRSKG 171


>BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  181 bits (440), Expect = 4e-45
 Identities = 96/171 (56%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = +3

Query: 81  DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
           DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+S+
Sbjct: 4   DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63

Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
           SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64  SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123

Query: 441 DQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
           DQLAL +P G  TVL  G R  + + R       APG P SHTK YVR+KG
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRH---FGKAPGTPHSHTKPYVRSKG 171


>AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  181 bits (440), Expect = 4e-45
 Identities = 96/171 (56%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = +3

Query: 81  DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
           DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+S+
Sbjct: 4   DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63

Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
           SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64  SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123

Query: 441 DQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
           DQLAL +P G  TVL  G R  + + R       APG P SHTK YVR+KG
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRH---FGKAPGTPHSHTKPYVRSKG 171


>BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  179 bits (435), Expect = 1e-44
 Identities = 95/171 (55%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
 Frame = +3

Query: 81  DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 260
           DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP+ +
Sbjct: 4   DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLCL 63

Query: 261 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 440
           SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTF
Sbjct: 64  SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123

Query: 441 DQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLAPGAPXSHTKXYVRTKG 587
           DQLAL +P G  TVL  G R  + + R       APG P SHTK YVR+KG
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRH---FGKAPGTPHSHTKPYVRSKG 171


>DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18
           protein.
          Length = 164

 Score =  157 bits (382), Expect = 4e-38
 Identities = 81/136 (59%), Positives = 100/136 (73%), Gaps = 2/136 (1%)
 Frame = +3

Query: 186 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 365
           TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE   AVVVGT+T+DVR+ ++PK+
Sbjct: 16  TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75

Query: 366 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL--GTRSAKMLVRQCVTLXLA 539
            V AL VT +AR+RIL AGG+ILTFDQLAL +P G  TVL  G R  + + R       A
Sbjct: 76  KVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRH---FGKA 132

Query: 540 PGAPXSHTKXYVRTKG 587
           PG P SHTK YVR+KG
Sbjct: 133 PGTPHSHTKPYVRSKG 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,285,761
Number of Sequences: 237096
Number of extensions: 2318127
Number of successful extensions: 7915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7909
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)