Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O21
         (885 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    87   7e-16
UniRef50_A7HUA6 Cluster: Acyl-CoA dehydrogenase domain protein; ...    34   4.2  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 86.6 bits (205), Expect = 7e-16
 Identities = 40/56 (71%), Positives = 47/56 (83%)
 Frame = +2

Query: 227 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAK 394
           EF KT  +QFNSL  SK+ QDF+KA KDGS+SVLQQL+AF+ SLQGA+ DANGKAK
Sbjct: 41  EFQKTFSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQGAISDANGKAK 96


>UniRef50_A7HUA6 Cluster: Acyl-CoA dehydrogenase domain protein;
           n=8; Bacteria|Rep: Acyl-CoA dehydrogenase domain protein
           - Parvibaculum lavamentivorans DS-1
          Length = 364

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 309 SFQALLKSCASFDLVSELNCCSKVLWNSLGVVFD-VLEEVGSVASHHRSLGPE 154
           SFQA+   CA  ++ SEL  C  ++W + G  FD V EE   +A+H +SL  E
Sbjct: 258 SFQAVKHMCA--EMASELEPCRSLIWYA-GHAFDEVPEESSLMAAHAKSLTTE 307


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,453,830
Number of Sequences: 1657284
Number of extensions: 8400230
Number of successful extensions: 27993
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27951
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)