Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O21
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   1.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 291 KSCASFDLVSELNCCSKVLWNSLGVVFDVLEEVGSVASH 175
           KS A+FD V+  +    +LW S     DV+E+  S A +
Sbjct: 418 KSLAAFDFVARNSDTPIILWTSHLTQADVIEKYLSKARY 456


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 178 RRDAPDFFKDIEH 216
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 282 ASFDLVSELNCCSKVLWNSL 223
           A  D  SE++C S+ +W+ L
Sbjct: 102 ALLDTGSEVSCISEEVWSKL 121


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 233  GTPLVWCSMSLKKSGASRRTIAPLGQSDAGEENYELG 123
            G P+   S SL  +  +    A  G  +AGEE    G
Sbjct: 2064 GMPMYGQSFSLADNNQNGLNAATYGGGEAGEETRARG 2100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,584
Number of Sequences: 336
Number of extensions: 1853
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)