Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O20
(863 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 63 3e-10
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 53 3e-07
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 51 1e-06
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 31 1.2
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 30 2.8
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_54874| Best HMM Match : Toxin_28 (HMM E-Value=1.3) 29 3.7
SB_16650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_58420| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_27940| Best HMM Match : IncA (HMM E-Value=0.41) 29 6.5
SB_15804| Best HMM Match : Toxin_28 (HMM E-Value=8.6) 29 6.5
SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 28 8.5
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 72.5 bits (170), Expect = 4e-13
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +3
Query: 216 RMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGL 395
+ LP D+DP L CTH++Y +A I P T K+ + D Y+ I LK K P L
Sbjct: 416 KFLPKDIDPLL--CTHIVYAFAKIDPATNKIGTYEWNDDRL-----YKEINDLKLKNPSL 468
Query: 396 TVLLSVGGDADTEEP-EKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS*A* 572
LL+VGG P ++ ++ S+ RT FI+S + L+++Y FDG DL P S
Sbjct: 469 KTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDFDGFDLDWEYPASRGN 528
Query: 573 EDPLD 587
P D
Sbjct: 529 SPPQD 533
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/111 (31%), Positives = 58/111 (52%)
Frame = +3
Query: 225 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVL 404
P D+DP L CTH+L+ +A + T+KL + H+ Y+ I +LK P L
Sbjct: 42 PEDIDPFL--CTHILFSFAKVNQTTHKL-----DIYEENDHELYQRINALKKINPKLKTQ 94
Query: 405 LSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVP 557
++VGG E+ ++ ++ +++ R FI S + +GFDG+DL P
Sbjct: 95 IAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDGLDLDWEYP 145
Score = 53.2 bits (122), Expect = 3e-07
Identities = 31/111 (27%), Positives = 54/111 (48%)
Frame = +3
Query: 225 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVL 404
P D+DP L CTH+++ ++ + T+ + D Y+ I +LK P L
Sbjct: 427 PEDIDPHL--CTHVIHSFSKVNLTTHVMEKYEK-----NDFDLYKRINALKKINPKLKTQ 479
Query: 405 LSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVP 557
++VGG E+ ++ ++ +++ R FI S + GFDG+DL P
Sbjct: 480 IAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFDGLDLDWEYP 530
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 53.2 bits (122), Expect = 3e-07
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDN--YRAITSLKAKYPGLTVLLSVGG 419
+ T LL G+A + + L + +D+ Y+ LK K PGL LL+VGG
Sbjct: 149 MQLLTLLLLGFASFAAASNYVHRCRHTLAMFEWNDDKLYKEFNDLKLKNPGLKTLLAVGG 208
Query: 420 DADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS*A*EDPLD 587
++ ++ + +R FI+S + + Q+ FDG DL P + DP D
Sbjct: 209 WNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDGFDLDWEYPGNRVGSDPGD 264
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Frame = +3
Query: 210 QARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDN--YRAITSLKAK 383
+A+ P D+ PA CTHL+Y +A I L + +D+ Y +LK K
Sbjct: 35 RAKFWPEDI-PA-DLCTHLMYSFAKINQKN--------ELAMYEWNDDKLYPRFNALKQK 84
Query: 384 YPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS 563
P L LL+VGG ++ ++++ R FI+S + + +GFDG+DL P +
Sbjct: 85 NPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGFDGLDLDWEYPAT 144
Query: 564 *A*EDPLD 587
P D
Sbjct: 145 RGGSPPED 152
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 46.0 bits (104), Expect = 4e-05
Identities = 32/115 (27%), Positives = 53/115 (46%)
Frame = +3
Query: 213 ARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPG 392
A+ P ++DP+L CTH++Y +A + D KL Y+ + LK+
Sbjct: 38 AKYTPDNIDPSL--CTHIVYAFAKMNADNSKLAMFE-----WNDAAMYKKVNDLKSS-SN 89
Query: 393 LTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVP 557
+ LL+VGG P + ++ + R FI+ +L + FDG+DL P
Sbjct: 90 MKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYP 142
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 354 YRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDG 533
Y+ + LK+ + LL+VGG P + ++ + R FI+ +L + FDG
Sbjct: 2 YKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDG 58
Query: 534 IDLALAVP 557
+DL P
Sbjct: 59 LDLDWEYP 66
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = -1
Query: 638 TGVVPNXFLIPCQSDPQVERIFLGLTLGNCQGEVNSIETILFSQQHSGINESSTGLLRFQ 459
T ++P + ++D ++ R+ G+T+ G + +I+ +L ++ +++ GL R +
Sbjct: 76 TRIIPRHLQLAVRNDEELNRLLHGVTIAQ-GGVLPNIQAVLLPKKSEKKHKNIPGLFRAK 134
Query: 458 QKVIF 444
Q +F
Sbjct: 135 QTELF 139
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = -1
Query: 638 TGVVPNXFLIPCQSDPQVERIFLGLTLGNCQGEVNSIETILFSQQHSGINESSTGLLRFQ 459
T ++P + ++D ++ R+ G+T+ G + +I+ +L ++ +++ GL R +
Sbjct: 76 TRIIPRHLQLAVRNDEELNRLLHGVTIAQ-GGVLPNIQAVLLPKKSEKKHKNIPGLFRAK 134
Query: 458 QKVIF 444
Q +F
Sbjct: 135 QTELF 139
>SB_54874| Best HMM Match : Toxin_28 (HMM E-Value=1.3)
Length = 506
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -2
Query: 532 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 404
P P C A S+ E + ++R D RR+ F G V PP N
Sbjct: 384 PDIPICVAASSSEFVSSIRIWIRDDRGRRVDFKGKPVRLCPPPAN 428
>SB_16650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 539 PRPGSSQELSLRRSARPGDRFGMELRRXSAPRQSMRRNLSTVKGFTALVRELKQALIHKP 718
P +SQ+ S SA PG L ++P+Q NL T+ F++ + +IH P
Sbjct: 299 PGSSASQQFSPSPSASPGGASSTTLSNPASPQQPQSPNLLTMSTFSS-----QSQVIHLP 353
Query: 719 XMQLGGD 739
+ D
Sbjct: 354 PQIVNSD 360
>SB_58420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 351 CRVFGLCPGXRLRTPAYRCQAGYRHSRTASGCRTTERDRGPTAAC 217
CR+FG L YR Q Y+H+R C T E+ R C
Sbjct: 483 CRLFGAIFDNSLGKTRYRSQ--YKHTRRRHPCSTCEQYRSRNRNC 525
>SB_27940| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 418
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 532 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 404
P P C A S E + ++R D RR+ F G V PP N
Sbjct: 183 PDIPICVAASPSEFVSSIRIWIRDDRGRRVDFKGKPVRLCPPPAN 227
>SB_15804| Best HMM Match : Toxin_28 (HMM E-Value=8.6)
Length = 329
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 532 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 404
P P C A S E + ++R D RR+ F G V PP N
Sbjct: 183 PDIPICVAASPSEFVSSIRIWIRDDRGRRVDFKGKPVRLCPPPAN 227
>SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 532 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 404
P P C A S E + ++R D RR+ F G V PP N
Sbjct: 183 PDIPICVAASPSEFVSSIRIWISDDRGRRVDFKGKPVRLCPPPAN 227
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 348 DNYRAITSLKAKYPGLT---VLLSVGGDADTEEPEKYNL 455
DNY + + YP T V+LS GDA T +KY L
Sbjct: 112 DNYASCKLIPLTYPYYTPPVVILSANGDASTLPSDKYAL 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,917,117
Number of Sequences: 59808
Number of extensions: 437831
Number of successful extensions: 1019
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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