BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O20
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 46 3e-05
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 45 6e-05
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 37 0.021
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 36 0.049
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 35 0.086
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 33 0.35
Z81479-6|CAB03938.1| 411|Caenorhabditis elegans Hypothetical pr... 30 2.4
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 29 4.3
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 29 5.7
U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical pr... 28 9.9
AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alph... 28 9.9
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 46.4 bits (105), Expect = 3e-05
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +3
Query: 210 QARMLPLDLDPALSFCTHLLYGYAGIQPD-TYKLVSLNXXLDIXRTHDNYRAITSLKAKY 386
+A+ +P D P L CTH+L+ + + D T + + YR + LK
Sbjct: 69 RAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLKVTD 126
Query: 387 PGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVP 557
L LLS GG + + + S +R FI+S + +GFDGID+ P
Sbjct: 127 TQLKTLLSFGGWSFGTA--LFQGMAASSASRKVFIDSAITFVRTWGFDGIDIDWEYP 181
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 45.2 bits (102), Expect = 6e-05
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +3
Query: 210 QARMLPLDLDPALSFCTHLLYGYAGIQPD-TYKLVSLNXXLDIXRTHDNYRAITSLKAKY 386
+A+ +P D P L CTH+L+ + + D T + + YR + LK
Sbjct: 8 RAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLKVTD 65
Query: 387 PGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
L LLS GG + + + S +R FI+S +GFDGIDL
Sbjct: 66 TQLKTLLSFGGCSFGTA--LFQGMAASSASRKVFIDSATTSVRTWGFDGIDL 115
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +3
Query: 363 ITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
+ + +++P L +L +VGG E + +++L R+ I++ V + ++YGFDG+D+
Sbjct: 84 VKEVASRHPDLKLLYAVGG---WENSQYFSVLTADHSRRSILISNFVKVIKEYGFDGVDI 140
Query: 543 ALAVP 557
P
Sbjct: 141 DWEYP 145
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 375 KAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
K + P + V++S+GGD + + +L S R F+N+ + YG DGIDL
Sbjct: 65 KQQTPPVKVMISIGGD---DNSNNFYKVLNSPNRRKVFLNATTSFLQIYGIDGIDL 117
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +3
Query: 393 LTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPK 560
L V++S+GG +++ ++ L+ ++ +R F+NS V ++Y DGI++ PK
Sbjct: 172 LKVMISIGGQSNSRS---FSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWPK 224
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/105 (24%), Positives = 49/105 (46%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDA 425
L TH++Y +A + +V N R +S L +++S+GG
Sbjct: 136 LQMLTHIIYLFAIPRNGVITIVDDRSLRKFEEMKSNAREASST------LKIMISIGGHY 189
Query: 426 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPK 560
++ ++ L+ ++ +RT F+NS V E+Y DGI++ P+
Sbjct: 190 NSRS---FSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMFWMWPR 231
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 36.3 bits (80), Expect = 0.028
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 375 KAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
K + P + V++S+GG+ + + +L S + FINS V + Y DG+DL
Sbjct: 142 KQQTPQVKVMISIGGN---DNSNNFKPVLSSPDRKKLFINSTVSFLQTYDIDGVDL 194
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 387 PGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPK 560
P L +L+S+GG A+++ + ++ S + FINS V ++Y DG+DL P+
Sbjct: 142 PKLKMLISIGGPANSDN---FLPVISSPDRKKIFINSIVSFLKKYDIDGVDLFWKWPR 196
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 35.5 bits (78), Expect = 0.049
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 393 LTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPK 560
L V++S+GG ++ E ++ L+ ++ +R F+NS Y DG+D+ PK
Sbjct: 174 LKVMISIGGQYNSGE---FSGLVSNETSRNLFVNSIATFVRDYDIDGVDIFWTWPK 226
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 34.7 bits (76), Expect = 0.086
Identities = 14/48 (29%), Positives = 32/48 (66%)
Frame = +3
Query: 399 VLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
++ S+GG A+T+ ++ ++++++ + FI+S + +QY DG+DL
Sbjct: 151 IMFSIGGPANTQF---FSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDL 195
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 375 KAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
K + P + V++S+GG+ + + L S + FINS V + Y DG+DL
Sbjct: 140 KQQTPQVKVMISIGGN---DNSNNFKPGLSSPDRKKLFINSTVSFLQTYDIDGVDL 192
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 399 VLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
+++S+GG E + ++ ++ES+ R FINS + ++ DGIDL
Sbjct: 136 IMISIGGK---ENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDL 180
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDA 425
+S TH ++ + I D L D+ + I K + P + V++S+GG+
Sbjct: 62 VSNLTHAVFAFVNITSDG----QLQIDGDLAKNRFT-NLIEIAKQQTPQVKVMISIGGN- 115
Query: 426 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGI 536
+ + +L S + FINS V + Y DG+
Sbjct: 116 --DNSNNFKPVLSSPDRKKLFINSTVSFLQTYDIDGV 150
>Z81479-6|CAB03938.1| 411|Caenorhabditis elegans Hypothetical
protein C34F6.7 protein.
Length = 411
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = -2
Query: 553 TARARSIPSKPYCSANSTPELMKAVRACCDSSRRLYFSGSSVSASPPTDNNTVRP 389
T R ++ P + + ++K R+C +R++F +PP +N RP
Sbjct: 301 THRVKASEKDPCFACGTEENMVKIERSCDGQEQRVFFHDIGARFTPPCENCICRP 355
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDT-YKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSV 413
++ CTHL+YG I DT Y S++ ++ DN R L+ +P +L+ V
Sbjct: 48 ITTCTHLVYGSIPIDRDTGYPQYSVS-DVESGYDIDNIRTFMRLRKYHPNAKLLMGV 103
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYR-AITSLKAKYPGLTVLLSVGG- 419
LS TH ++ + +QPD L R I A+ L V++S+GG
Sbjct: 94 LSQLTHAIFAFIKLQPD--------GTLQFQSGSAKQRFLILKTNAESSTLKVMISIGGM 145
Query: 420 DADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
D +++ ++L++ ++ R + I S V ++ DG+D+
Sbjct: 146 DINSD----FSLVISDEKKRRSLIESIVSFLTEHQIDGVDI 182
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 402 LLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
LLS+GG ++T+ L++ + + F S + + E+Y DG+DL
Sbjct: 143 LLSIGGRSNTQF---LPLVIADPRRKRRFFKSIISILEEYQLDGVDL 186
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDA 425
LS TH ++ + + PD L N ++ R + + +K + ++ S+GG
Sbjct: 92 LSNLTHTVFAFVYMTPDGTLL--FNNQIEKNRFLKLKEVVRNGNSK---IKLMFSIGGK- 145
Query: 426 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
+ + ++ ++ S++ FI S + E Y DG+DL
Sbjct: 146 --DNSKYFSSVIPSEERIQTFIESILEFLEAYDLDGVDL 182
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +3
Query: 246 LSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDA 425
LS TH ++ + + PD L N ++ R + + +K + ++ S+GG
Sbjct: 92 LSNLTHTVFAFVYMTPDGTLL--FNNQIEKNRFLKLKEVVRNGNSK---IKLMFSIGGK- 145
Query: 426 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDL 542
+ + ++ ++ S++ FI S + E Y DG+DL
Sbjct: 146 --DNSKYFSSVIPSEERIQTFIESILEFLEAYDLDGVDL 182
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 369 SLKAK----YPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGI 536
SLK+K + L ++ S+GGD ++ + ++ L + Q ++ I S + + DG+
Sbjct: 127 SLKSKARSLHSNLKLMFSIGGDENSFD---FSSALANTQMKSTLITSIIAFIHSHMIDGV 183
Query: 537 DLALAVPKS 563
DL P S
Sbjct: 184 DLHWKWPTS 192
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 330 DIXRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLL 509
D + HD I LK K+ L + + + ++ YNL + +A + + G+ +
Sbjct: 506 DSLKVHDVLMEIADLKQKHSKLEKHVEGLKEENLKQERNYNLTQSNLEANLSSMREGLTI 565
Query: 510 AEQY 521
+QY
Sbjct: 566 LQQY 569
>U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical
protein T27F7.3a protein.
Length = 496
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 702 ACFNSRTRAVKPFTVLRFLLIDWRG 628
A F SR V PFT R ++ +WRG
Sbjct: 348 ALFTSRYHQVGPFTAPRRIMEEWRG 372
>AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alpha 2
mannosyltransferaseprotein.
Length = 496
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 702 ACFNSRTRAVKPFTVLRFLLIDWRG 628
A F SR V PFT R ++ +WRG
Sbjct: 348 ALFTSRYHQVGPFTAPRRIMEEWRG 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,780
Number of Sequences: 27780
Number of extensions: 303835
Number of successful extensions: 685
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -