Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O20
(863 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 43 2e-04
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 43 2e-04
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 41 0.001
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 40 0.003
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 36 0.035
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 34 0.14
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 33 0.25
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 29 4.0
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 29 5.3
At2g40095.1 68415.m04928 expressed protein 28 7.0
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 28 9.2
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 231 DLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAIT-SLKAKYPGLTVLL 407
D+D +L THL +A ++ ++Y++ + A T +++ + P + LL
Sbjct: 22 DIDSSLF--THLFCTFADLEAESYEITIATW------NQAPFHAFTETVQQRNPHVKTLL 73
Query: 408 SVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS 563
S+GG + + + + + +R +FI S + +A YGF G+DL P++
Sbjct: 74 SIGGG--NADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRN 123
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/101 (29%), Positives = 46/101 (45%)
Frame = +3
Query: 258 THLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEE 437
THL +A + P T +V + N+ I +K K P + LLS+GG +
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGR--NAD 91
Query: 438 PEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPK 560
+ + + +R +FI S + A Y FDG+DL PK
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/111 (26%), Positives = 51/111 (45%)
Frame = +3
Query: 231 DLDPALSFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLS 410
D+D +L THL +A + T ++ + T +++ + P + LLS
Sbjct: 43 DIDSSLF--THLFCAFADLNSQTNQVTVSSANQPKFSTFTQ-----TVQRRNPSVKTLLS 95
Query: 411 VGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS 563
+GG + Y + + +R +FI+S + +A YGF G+DL P S
Sbjct: 96 IGGGI--ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSS 144
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +3
Query: 249 SFCTHLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAIT-SLKAKYPGLTVLLSVGGDA 425
S THL +A I TY+++ + R + T +++ + P + LLS+GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSS------RNKPKFSTFTQTVRRRNPTVKTLLSIGGDF 98
Query: 426 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVP 557
+ + + +R FI+S + LA GF G+DL P
Sbjct: 99 TYN--FAFASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 35.9 bits (79), Expect = 0.035
Identities = 26/102 (25%), Positives = 49/102 (48%)
Frame = +3
Query: 258 THLLYGYAGIQPDTYKLVSLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEE 437
THL +A + T+++ + ++ ++K K + LLS+GG D ++
Sbjct: 46 THLFCAFADVDSSTHEVT-----ISAANSYQFSSFTETVKEKNTDVQTLLSIGGK-DADK 99
Query: 438 PEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS 563
++ S+ R AFI+S + +A + F G+DLA P +
Sbjct: 100 AVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAWEYPSN 140
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +3
Query: 258 THLLYGYAGIQPDTYKLV--SLNXXLDIXRTHDNYRAITSLKAKYPGLTVLLSVGGDADT 431
THL +A + T+++ + N TH ++K K + LLS+GG D
Sbjct: 38 THLFCAFADVDSSTHEVTISAANSCQVSSFTH-------TVKDKNTDVQTLLSIGGK-DA 89
Query: 432 EEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS 563
++ ++ S+ R AFI+S + +A + F G+DLA P +
Sbjct: 90 DKAVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAWEYPSN 132
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 456 LLESQQARTAFINSGVLLAEQYGFDGIDLALAVPKS 563
+ S R +FI S + +A YGFDG+DL P++
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRN 36
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 378 AKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL 506
AK G +L +GG ++TE EK + + ++ A A + G++
Sbjct: 401 AKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIV 443
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 550 QFPRVKPKKIRS-TWGSLWHGIKKXFGTTPVDEKESEHRER 669
++ R+ K+ S WG W +KK F T DE+ E R
Sbjct: 550 EYERLSSKQKSSHNWGLRWQKVKKSFQTKREDEETRERTRR 590
>At2g40095.1 68415.m04928 expressed protein
Length = 209
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 553 FPRVKPKKIRSTWGSLWHGIKKXF 624
F + + K R W SLW GIK F
Sbjct: 3 FSKEEISKTRKLWSSLWRGIKTIF 26
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 378 AKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL 506
AK G +L +GG ++ E EK + + ++ A A + G+L
Sbjct: 400 AKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIL 442
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,654,659
Number of Sequences: 28952
Number of extensions: 289275
Number of successful extensions: 711
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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