Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O16
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    27   0.26 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   7.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.7  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 302 YQHQTLRDHFQ*DDGKRTKRTHQETKTFRP 391
           YQHQ L   +  DDGK  +RT  E    RP
Sbjct: 227 YQHQPLLFTYT-DDGKNQQRTGTELTKMRP 255


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 746 RTAASEKP*PGKLGAIISRAK 684
           R  +S+K  PGK   +ISRAK
Sbjct: 239 RPRSSQKSAPGKRTPLISRAK 259


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 505 WLRNFCLSANGXSSAQYLSQLSNCFELNPYLKP 407
           W +  CL      +   ++  +N    +PYL P
Sbjct: 84  WFKIHCLLQEQQQAGANMAAAANLLRPHPYLSP 116


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 480 AERQKFLNQYPHFKTNIQG 536
           AER++ L  YP +K ++ G
Sbjct: 58  AERERGLKYYPIYKLDVCG 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,774
Number of Sequences: 336
Number of extensions: 3991
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)