Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_O16
(885 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identica... 34 0.11
At1g13090.1 68414.m01518 cytochrome P450 71B28, putative (CYP71B... 34 0.11
At3g26210.1 68416.m03270 cytochrome P450 71B23, putative (CYP71B... 33 0.19
At1g13100.1 68414.m01519 cytochrome P450 71B29, putative (CYP71B... 33 0.25
At5g20930.1 68418.m02486 protein kinase, putative nearly identic... 31 1.0
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 31 1.0
At3g26180.2 68416.m03267 cytochrome P450 71B20, putative (CYP71B... 30 1.8
At3g26180.1 68416.m03266 cytochrome P450 71B20, putative (CYP71B... 30 1.8
At2g45340.1 68415.m05642 leucine-rich repeat transmembrane prote... 29 3.1
At3g26220.1 68416.m03271 cytochrome P450 family protein identica... 29 4.1
At2g38660.1 68415.m04748 tetrahydrofolate dehydrogenase/cyclohyd... 29 4.1
At1g09620.1 68414.m01079 tRNA synthetase class I (I, L, M and V)... 28 7.2
>At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identical
to (SP:Q96514) cytochrome P450 71B7 [Arabidopsis
thaliana]; PF|00067 Cytochrome P450 family. ESTs
gb|T44875, gb|T04814, gb|R65111, gb|T44310 and gb|T04541
come from this gene; identical to cDNA cytochrome P450
GI:1523795, ATCYP71B7
Length = 504
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 569 LWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
LW+NP E N LD S++ R L ELLPF CP
Sbjct: 410 LWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICP 447
>At1g13090.1 68414.m01518 cytochrome P450 71B28, putative (CYP71B28)
Identical to Cytochrome P450 (SP:Q9SAE3) [Arabidopsis
thaliana]; strong similarity to gb|X97864 cytochrome
P450 from Arabidopsis thaliana and is a member of the
PF|00067 Cytochrome P450 family. ESTs gb|N65665,
gb|T14112, gb|T76255, gb|T20906 and gb|AI100027 come
from this gene
Length = 490
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 569 LWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
LW+NP E N LD S++ R L ELLPF CP
Sbjct: 404 LWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICP 441
>At3g26210.1 68416.m03270 cytochrome P450 71B23, putative (CYP71B23)
Identical to Cytochrome P450 71B23
(SP:Q9LTM0)[Arabidopsis thaliana];contains Pfam profile:
PF00067 cytochrome P450
Length = 501
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 572 DLWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
DLW NP E + +D S++ R L ELLPF CP
Sbjct: 406 DLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICP 444
>At1g13100.1 68414.m01519 cytochrome P450 71B29, putative (CYP71B29)
strong similarity to gb|X97864 cytochrome P450 and
identical to Cytochrome P450 71B29
(SP:Q9SAE4)[Arabidopsis thaliana];PF|00067 Cytochrome
P450 family
Length = 490
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 569 LWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
LW+NP E N LD S++ + L ELLPF CP
Sbjct: 404 LWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICP 441
>At5g20930.1 68418.m02486 protein kinase, putative nearly identical
to protein kinase tousled gi|433052|gb|AAA32874
Length = 688
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 321 RRV*CWYPVSV*VRAVPTTPPGLAEASAVDSSE 223
++V W S V+ V +TPPGL+E S DS +
Sbjct: 51 QQVSLWSSASAAVKVVTSTPPGLSETSISDSDD 83
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +3
Query: 228 KSPPPMPQLDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLE 401
K P P D+E WW L + I IT S +++L I+ RP PP E
Sbjct: 483 KEKPKEPIPDVE-WWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAE 539
>At3g26180.2 68416.m03267 cytochrome P450 71B20, putative (CYP71B2)
identical to cytochrome P450 71B20 (SP:Q9LTM3)
[Arabidopsis thaliana]; similar to cytochrome P450
GB:O65784 [Arabidopsis thaliana]
Length = 368
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 569 LWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
LW+NP E + + +D S++ R ELLPF CP
Sbjct: 274 LWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICP 311
>At3g26180.1 68416.m03266 cytochrome P450 71B20, putative (CYP71B2)
identical to cytochrome P450 71B20 (SP:Q9LTM3)
[Arabidopsis thaliana]; similar to cytochrome P450
GB:O65784 [Arabidopsis thaliana]
Length = 502
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 569 LWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
LW+NP E + + +D S++ R ELLPF CP
Sbjct: 408 LWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICP 445
>At2g45340.1 68415.m05642 leucine-rich repeat transmembrane protein
kinase, putative
Length = 691
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 522 TNIQGLXIHFMRITPXVPKGVEIVPLL 602
T++ GL +HF +T +PK + +PLL
Sbjct: 92 TSLTGLYLHFNSLTGHIPKDISNLPLL 118
>At3g26220.1 68416.m03271 cytochrome P450 family protein identical
to cytochrome P450 monooxygenase (CYP71B3) GB:D78602
[Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52
(1998))
Length = 501
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 572 DLWSNPHEVNXQT-LDISLEMRILVKELLPFSEWVXFCP 459
+LW NP E N + +D ++ + E+LPF CP
Sbjct: 408 ELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICP 446
>At2g38660.1 68415.m04748 tetrahydrofolate
dehydrogenase/cyclohydrolase, putative similar to
SP|P09440 C-1-tetrahydrofolate synthase, mitochondrial
precursor (C1-THF synthase) [Includes:
Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9);
Formyltetrahydrofolate synthetase (EC 6.3.4.3)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase,
NAD(P)-binding domain, PF00763: Tetrahydrofolate
dehydrogenase/cyclohydrolase, catalytic domain
Length = 352
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +3
Query: 198 RPYHCTSSXLKSPPPMPQLDLEEWWGP 278
R HC SS L S PP+ LDL E W P
Sbjct: 22 RDVHCFSSILVS-PPLVSLDLPENWIP 47
>At1g09620.1 68414.m01079 tRNA synthetase class I (I, L, M and V)
family protein similar to cytosolic leucyl-tRNA
synthetase [Candida albicans] GI:9858190; contains Pfam
profile PF00133: tRNA synthetases class I (I, L, M and
V)
Length = 1084
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/59 (18%), Positives = 28/59 (47%)
Frame = +3
Query: 204 YHCTSSXLKSPPPMPQLDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRR 380
+HCT +K+ + ++E++ PP + T + + S+T+ + + K ++
Sbjct: 90 FHCTGMPIKASADKLRREIEQFGNPPVFTAEDTTKVPEVQEESSDTIALPIPGQFKGKK 148
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,716,503
Number of Sequences: 28952
Number of extensions: 355764
Number of successful extensions: 894
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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