Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O14
         (901 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome s...    34   5.7  
UniRef50_UPI0000ECD072 Cluster: UPI0000ECD072 related cluster; n...    33   7.5  
UniRef50_Q5C7F5 Cluster: SJCHGC06841 protein; n=1; Schistosoma j...    33   9.9  
UniRef50_A4H3R8 Cluster: Putative uncharacterized protein; n=2; ...    33   9.9  

>UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF15000, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 307

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = -3

Query: 737 YPPXXFFFXXNPXXPPFXXFFFXTXPXLFKXFXYPPPXFFIXXPPPXPLFXXF 579
           +PP  FFF  +   PP     F   P L   +  PPP      PPP PLF  F
Sbjct: 144 FPPLFFFFPFSFFPPP-----FPPSPPLSPPYFPPPPPL---PPPPFPLFPLF 188


>UniRef50_UPI0000ECD072 Cluster: UPI0000ECD072 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD072 UniRef100 entry -
           Gallus gallus
          Length = 92

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 248 GKKXXXXXXGGEXXKXXGXXGEKKKKKKXKXXXKKKKK 361
           G+K       G+  +  G  GE+KKKKK K   KKK+K
Sbjct: 20  GEKKKQRRREGKGREGKGREGERKKKKKRKKEKKKKRK 57


>UniRef50_Q5C7F5 Cluster: SJCHGC06841 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06841 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 125

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +2

Query: 239 GGGGKKXXXXXXGGEXXKXXGXXGEKKKKKKXKXXXKKKKKGXXXFFFLKKXGGXXGXG 415
           GGGG+K      GG          +++  KK     +   K    FFFLKK GG  G G
Sbjct: 37  GGGGEKKKKGGGGGGPPPPPFFFFKERVPKKFFFWGRGLFKKIKKFFFLKKKGGEWGFG 95


>UniRef50_A4H3R8 Cluster: Putative uncharacterized protein; n=2;
            Leishmania braziliensis|Rep: Putative uncharacterized
            protein - Leishmania braziliensis
          Length = 2825

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 28/87 (32%), Positives = 29/87 (33%), Gaps = 7/87 (8%)
 Frame = -3

Query: 815  FFFXFFXPXXXXFFFFXXXXXXNIFXYPPXXFFFXXNPXXPPFXXFFFXTXPXLFKXFXY 636
            FFF         FFFF           PP  FF    P  PPF  FF    P     F +
Sbjct: 1898 FFFQMHCRGGPLFFFFSKARRGG----PPFFFFLRSRPGGPPF-FFFLKGLPGGPPFFFF 1952

Query: 635  -------PPPXFFIXXPPPXPLFXXFF 576
                   PP  FF    P  P F  FF
Sbjct: 1953 SEALPGGPPFFFFSDALPGGPPFFLFF 1979


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,824,835
Number of Sequences: 1657284
Number of extensions: 3592487
Number of successful extensions: 14478
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11857
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)