Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O14
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0103 - 19768288-19768737                                         29   3.8  
02_01_0475 + 3422629-3422695,3422960-3423216                           29   3.8  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   5.0  
11_04_0350 - 16658497-16659015                                         29   6.7  
05_01_0568 + 4973031-4973161,4973514-4974321,4974394-4974690           29   6.7  

>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 311 EKKKKKKXKXXXKKKKKG 364
           +KKKKKK K   KKKKKG
Sbjct: 123 KKKKKKKKKKKKKKKKKG 140


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 308 GEKKKKKKXKXXXKKKKK 361
           G+KKKKKK K   KKKKK
Sbjct: 42  GKKKKKKKKKKKKKKKKK 59



 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +2

Query: 275 GGEXXKXXGXXGEKKKKKKXKXXXKKKKK 361
           G E  K      +KKKKKK K   KKKKK
Sbjct: 38  GFEEGKKKKKKKKKKKKKKKKKKKKKKKK 66


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
 Frame = -3

Query: 737 YPPXXFFFXXNPXXPPFXXFFFXTXPXLFKXFXYPPPXFFIXXPPPXPLFXXFFFXXXXL 558
           +PP  F     P  PPF  F     P L      PPP  F    PP P      F    L
Sbjct: 226 FPPIPFL---TPPPPPFLPFPLPPIPFLTPPS--PPPPAFPFPLPPWPWAPPPAFPFPHL 280

Query: 557 QXXY-XPSPP 531
              +  PSPP
Sbjct: 281 PPIFSPPSPP 290



 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/50 (34%), Positives = 18/50 (36%)
 Frame = -3

Query: 737 YPPXXFFFXXNPXXPPFXXFFFXTXPXLFKXFXYPPPXFFIXXPPPXPLF 588
           +PP  F     P  PP    F    P  F  F  PP  F     PP P F
Sbjct: 214 WPPIPFC-TPRPWFPPIP--FLTPPPPPFLPFPLPPIPFLTPPSPPPPAF 260


>11_04_0350 - 16658497-16659015
          Length = 172

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +2

Query: 311 EKKKKKKXKXXXKKKKK 361
           EKKKKKK K   KKKKK
Sbjct: 31  EKKKKKKKKKKKKKKKK 47


>05_01_0568 + 4973031-4973161,4973514-4974321,4974394-4974690
          Length = 411

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +2

Query: 311 EKKKKKKXKXXXKKKKK 361
           EKKKKKK K   KKKKK
Sbjct: 13  EKKKKKKKKKKKKKKKK 29


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,748,831
Number of Sequences: 37544
Number of extensions: 153646
Number of successful extensions: 458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)