Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_O14
         (901 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024362-1|ABC86424.1|   81|Drosophila melanogaster IP07966p pro...    29   6.6  
BT011193-1|AAR88554.1|  155|Drosophila melanogaster LP01645p pro...    29   8.7  
AE014296-2884|AAF49360.1|  550|Drosophila melanogaster CG13724-P...    29   8.7  

>BT024362-1|ABC86424.1|   81|Drosophila melanogaster IP07966p
           protein.
          Length = 81

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 308 GEKKKKKKXKXXXKKKKK 361
           G+KKKKKK K   KKKKK
Sbjct: 59  GKKKKKKKKKKKKKKKKK 76


>BT011193-1|AAR88554.1|  155|Drosophila melanogaster LP01645p
           protein.
          Length = 155

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 308 GEKKKKKKXKXXXKKKKK 361
           G KKKKKK K   KKKKK
Sbjct: 138 GRKKKKKKKKKKKKKKKK 155


>AE014296-2884|AAF49360.1|  550|Drosophila melanogaster CG13724-PA
           protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +2

Query: 314 KKKKKKXKXXXKKKKKG 364
           KKKKKK K   KKKKKG
Sbjct: 260 KKKKKKYKGEKKKKKKG 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,801,081
Number of Sequences: 53049
Number of extensions: 220724
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)